LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g01996	ATGACGGATTCTGACCTGTGCCCGATTTGCAATATGTATGCGGTGTCCATCTTGCTTTTACACTGTGGAAGCATGTTTTTTGCGAAGCTAATCAAGTTGACGATGCACTTGCTAAGCCGTGAGGAACCCGAGCCGGAGGTTTGGCCATCCGAATTGGGTGTCCTAAGTGTGGTGGAAAGGTTCAGAAGCAGGCCTGAATTGGATCAGGGTAGGAAGAAAGTGAACCAAGAGAGTTTCGTTTCCCAAAGTATAGTGAAGGGTCAAGACAAGTTGCAGAAAGTTGTGAAGGAGAACAAGGAGATTGAAATGTCCTCGTTCATGACTCAGTGTCTTAATATAGGGAATGTTCAACCTTGTAAGAACATTACCACAGCTGATTTGAATGTTCTTTCATCTATGATTGAACAGGATCTGATGGACGTTGATAAAAGAATGGAAATGCAGAATTGCAACCAGCTGGAGGCACCATCTCAACTCCAGATGCAAACAACACCAACATACAaacctgatatgcaaaccctagcaaaccaacctgAAATGACACTGCTGAATTATGGCAATGGGTCTGATATGAATGTTAAACCTATGCCAAAGCAGGGATATATGGCCTTGCTTAATGGTGATGATGATGATGAGACAACAATGTCTACATTTGGAGAACTCTGA	666	0.4084	MTDSDLCPICNMYAVSILLLHCGSMFFAKLIKLTMHLLSREEPEPEVWPSELGVLSVVERFRSRPELDQGRKKVNQESFVSQSIVKGQDKLQKVVKENKEIEMSSFMTQCLNIGNVQPCKNITTADLNVLSSMIEQDLMDVDKRMEMQNCNQLEAPSQLQMQTTPTYKPDMQTLANQPEMTLLNYGNGSDMNVKPMPKQGYMALLNGDDDDETTMSTFGEL	221

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma11g01996	221	PANTHER	AGAMOUS-LIKE MADS-BOX PROTEIN AGL80	42	182	-	-
	Gma11g01996	221	PANTHER	SERUM RESPONSE FACTOR HOMOLOG	42	182	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g01996	Gma-Chr11	33098580	33102948	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma11g01996	45	147	Type I MADS-box Gene Family	AT5G48670	47.573	1.03e-23	94.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g01996	-		-	gmx:100815178	245.358