Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01994 ATGGAAATAATTTCTATATGGGTAGTATTTGTCACAACCCTTTTCCTCCTAAACATGACCAATTGTGTGGAGGATGAGGTGAAGAGAACACTTATACAGTTTCTGGCTCAAGTCTCAGGTAATGATGGCCAGCAGAACTCCACTTTGATTTGGAGACAAGACTCTTCTGATCCTTGCAAGGATCTTTGGCAAGGTGTATATTGTGATCCTCAAAACATGTCCATAAAGCGGTTGCTACTTGACAGGCTCAATTTGTCTGGAAATCTTGGTGTCGCTATGCTTTGCAACTTGCAGCCCCTGGCTGCATCTCTCGCCTTTCTTAGCCTAGATGGTAACAAAATTAGTGGGGTGATAGCATCTGAGATTGGAAACTGCAAACAACTCACTCACCTACACCTTAGTGGAAACAAACTTACTGGAGACATTCCTAGTTCACTTGCCATGTTAAACAATTTGAAGAGCCTCGACATTTCGAATAATGAGATTTCGGGACCTTTGCCAAACTTGTCCAGAATCTCAGGTCTGAACATGTTCCTTGCACAAAACAATCATCTTAGAGGAACCATACCGGCCTTTGATTTCTCCAATTTTGACCAATTCAATGTCTCCTTTAACAATTTTAGAGGCCGCATTCCAAAAAACGTGTATGGCTATTTCTCTGCTGATAGCTTCCTTGGTAATCCTGAACTATGTGGAGATCCGCTACCAAAAAACTGTTCTGATCAGTTTATGTTTCTTAGTGAGACTCAGGCAAAAGAAGAATCAAAGGGTCCTTCTAAGCAGCAGATTCTAATGTACTCGGGCTATGCTGCTTTGGGTGTTATCATTGTCCTTTTTGTAGTCTTAAAGCTGTGTAGAAGAGAGAAGGGAATTGAAGCATTGAAAAACGGGGTAGGGGCCACTGATGGTGGTGGTATTGAAAAGCACAGCAATGTTTCAAGTGAATACAAAGATGAGGTAAGCAGATCCGAGTTTTCAGTGGCTTCTGAAAGTCGGATGGTTTCACAATCACTCATAGTTCTTTCAAGGCCAGCAGCAATTGAATTGAAATTGGAGGACTTGTTGAGGGCCCCTGCAGAATTGATTGGCAGAGGAAAGAATGGAAGTCTTTATAAGGTGATACTTGACAATGGGATAATGGTGGTTGTGAAAAGGATCAAGGATTGGACTATTTCAAGCCAAGATTTCAAGCAAAGAATGCAAATACTAAGTCAAGCAAAGGACCCTCATGTATTGTCACCTCTTGCTTTCTATTGCTCCAAACAAGAAAAGCTTTTGGTGTATGAATATCAGCAGAATGGAAGTTTATTCAAGCTTTTACATGGTACTCCAAAAACCTTTGACTGGACCAGCAGACTTGGGATAGCAGCTACAATTGCTGAGGCTTTATCTTTCATGCATCAAGAGCTAGGCCATCATGGTATTGTTCATGGTAACCTGAAATCCTCCAACATTTTGCTAAACAAGAATATGGAGCCATGTATAAGTGAATATGGTGTTATGGGTATGGATGATCAAAGAGGTTCCCTTTTTGCCAGTCCTATTGATGCCGGTGCATTAGATATCTTTAAGGAAGATGTTTATGGCTTTGGTGTGATTCTACTTGAATTGCTTACTGGTAAGTTAGTGAAGGGCAATGGGATTGACTTGACTGATTGGGTTCAGTCAGTTGTCAGGGAAGAGTGGACAGGTGAAGTCTTTGACAAGTCTCTAATATCCGAGTATGCAAGTGAGGAGAGGATGGTCAATTTGCTTCAGGTGGCTATAAGATGTGTCAATCGTTCACCACAGGCTAGGCCAGGCATGAACCAAATTGCTCTCATGATTAATACTATCAAAGAGGACGAAGAAAAATCCTTGATCTATGAACTGTGA 1875 0.4133 MEIISIWVVFVTTLFLLNMTNCVEDEVKRTLIQFLAQVSGNDGQQNSTLIWRQDSSDPCKDLWQGVYCDPQNMSIKRLLLDRLNLSGNLGVAMLCNLQPLAASLAFLSLDGNKISGVIASEIGNCKQLTHLHLSGNKLTGDIPSSLAMLNNLKSLDISNNEISGPLPNLSRISGLNMFLAQNNHLRGTIPAFDFSNFDQFNVSFNNFRGRIPKNVYGYFSADSFLGNPELCGDPLPKNCSDQFMFLSETQAKEESKGPSKQQILMYSGYAALGVIIVLFVVLKLCRREKGIEALKNGVGATDGGGIEKHSNVSSEYKDEVSRSEFSVASESRMVSQSLIVLSRPAAIELKLEDLLRAPAELIGRGKNGSLYKVILDNGIMVVVKRIKDWTISSQDFKQRMQILSQAKDPHVLSPLAFYCSKQEKLLVYEYQQNGSLFKLLHGTPKTFDWTSRLGIAATIAEALSFMHQELGHHGIVHGNLKSSNILLNKNMEPCISEYGVMGMDDQRGSLFASPIDAGALDIFKEDVYGFGVILLELLTGKLVKGNGIDLTDWVQSVVREEWTGEVFDKSLISEYASEERMVNLLQVAIRCVNRSPQARPGMNQIALMINTIKEDEEKSLIYEL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01994 624 Gene3D Transferase(Phosphotransferase) domain 1 432 622 - -
Gma11g01994 624 SUPERFAMILY Protein kinase-like (PK-like) 359 608 IPR011009 -
Gma11g01994 624 Pfam Protein kinase domain 360 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01994 624 Gene3D Ribonuclease Inhibitor 197 242 IPR032675 -
Gma11g01994 624 Gene3D Ribonuclease Inhibitor 24 196 IPR032675 -
Gma11g01994 624 PANTHER OS10G0387400 PROTEIN 2 623 - -
Gma11g01994 624 PANTHER OS05G0588300 PROTEIN 2 623 - -
Gma11g01994 624 ProSiteProfiles Leucine-rich repeat profile. 127 149 IPR001611 GO:0005515
Gma11g01994 624 SUPERFAMILY L domain-like 54 218 - -
Gma11g01994 624 Gene3D Phosphorylase Kinase; domain 1 321 430 - -
Gma11g01994 624 ProSiteProfiles Leucine-rich repeat profile. 151 173 IPR001611 GO:0005515
Gma11g01994 624 Pfam Leucine rich repeat 104 162 IPR001611 GO:0005515
Gma11g01994 624 ProSiteProfiles Protein kinase domain profile. 356 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01994 624 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01994 Gma-Chr11 32935945 32938425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01994 1 613 Receptor kinase-like Gene Family AT3G08680 33.078 1.85e-89 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma11g01994 PK_Tyr_Ser-Thr 3.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01994 - - gmx:100813796 1225.31