Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01993 ATGAGTTGTTCACTCAGATTGTTGCATCTGTGTAAAAAGGCTTCAATTTTTCAAAATGTTTGCCGCCAGGTTGAAGTTCTTTCGAAGAGGAAATTCTCCCATGCCCATCTTGCGCAGATGAAGTATATACTCCCTAAAAGTGTGTGTATAGATAGGGTGCTTGTTCATGATAAGAAAAGCTTGTGTATGGTGCCTGATATGAAGATCACCTTGAAATTTGAGGTTGTGGAAGATTGCTCTGGCGAATCTGCTGATCTGGCTCTTCGACGATATTTTAAATCTAAGCTGATTGATTTCTTTGATATGCATCCTGAGTCAACATCATCTTATAAGCCAGGAAAAAGAGTGCTTGACTTTTCCCTCATGGAGGACAATGATGGCTTGGGCATTGAAGTGGACAAGTTAGAATCTATCAGAGCTCTGCATGGATCTATTAGGTAA 441 0.4014 MSCSLRLLHLCKKASIFQNVCRQVEVLSKRKFSHAHLAQMKYILPKSVCIDRVLVHDKKSLCMVPDMKITLKFEVVEDCSGESADLALRRYFKSKLIDFFDMHPESTSSYKPGKRVLDFSLMEDNDGLGIEVDKLESIRALHGSIR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01993 146 PANTHER EXPRESSED PROTEIN 1 107 - -
Gma11g01993 146 Pfam DNA replication factor CDT1 like 8 51 IPR014939 -
Gma11g01993 146 PANTHER DNA REPLICATION FACTOR CDT1 1 107 IPR045173 GO:0003677|GO:0030174|GO:0071163
Gma11g01993 146 SUPERFAMILY "Winged helix" DNA-binding domain 3 106 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01993 Gma-Chr11 32452938 32453690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01993 4 105 Core DNA Replication Machinery Family AT2G31270 40.952 3.51e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01993 K10727 - gmx:102670055 206.068