Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01991 ATGAAGTGGGAAATGGAGATCCTCCCTCCTGCATCACCTTACACGTACAATTCCAATTGGCTTCTAGATGACAACAGGACCAACAACAACACCAAATGGACCCCTGCAGAGAACAAGCTGTTTGAGAATGCTCTTGCGGTTTACGATAAGGACACGCCGGATCGATGGCACAAGGTAGCCGAGATGATACCGGGAAAAACAGTCATGGATGTGGTGAAGCAGTACAAGGAATTGGAAGCAGATGTTTGTGACATAGAAGCAGGGTTGATCTCAATTCCAGGATACAGAAGCACCACCACCACCTCACCCTTCACCTTGGATTGGGTTAATCCTGCCTATGGTGATGGCTTCAAAGGACTCACTGCTAAGAGATCCTCCTCTGGCAGACCTCCTGAGCAGGAAAGGAAGAAAGGTGTGCCATGGACTGAAGAAGAACACAAGTTGTTTCTTCTGGGGCTGAAGAAGTATGGCAAAGGTGATTGGAGGAACATATCGCGCAATTATGTGATCACTCGGACGCCAACTCAAGTTGCTAGCCATGCTCAGAAGTACTTCATAAGGCAACTATCAGGAGGCAAGGACAAGAGGAGGGCTAGCATACATGACATTACAACGGTTAATCTCACAGAAACCACCAGAACTTCTTCTGATGAAAGCAAGAGATCCACTTCGCCACAACATTCCACTATTCTCTCACACCAGCAGCAGCAGCAGCAGCAGCCGAATTCTAGTGTCGCCTCATCCGGATTGAACCTCCAGTGGAGCAATCAGCCAAATGCAGGAGTGGCTATGCCACTCAACCCTGCACATGAACAAGTCTTCATGTCCCCTTATGGCCTTAACTCATATGGTTTTAAGATGCATGGCCAAAATCTGCACAGAAGTTCTGTTCATGAGTCTTCTTACCTAGGACCTCAGACACCAAACATGGTTTTCCAAATGCTGCCCTCCCAACACTATTCCCATGCATGA 972 0.4774 MKWEMEILPPASPYTYNSNWLLDDNRTNNNTKWTPAENKLFENALAVYDKDTPDRWHKVAEMIPGKTVMDVVKQYKELEADVCDIEAGLISIPGYRSTTTTSPFTLDWVNPAYGDGFKGLTAKRSSSGRPPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNYVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETTRTSSDESKRSTSPQHSTILSHQQQQQQQPNSSVASSGLNLQWSNQPNAGVAMPLNPAHEQVFMSPYGLNSYGFKMHGQNLHRSSVHESSYLGPQTPNMVFQMLPSQHYSHA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01991 323 ProSiteProfiles Myb-like domain profile. 133 185 IPR001005 -
Gma11g01991 323 SUPERFAMILY Homeodomain-like 31 84 IPR009057 -
Gma11g01991 323 Gene3D - 25 92 - -
Gma11g01991 323 Pfam Myb-like DNA-binding domain 32 76 IPR001005 -
Gma11g01991 323 Pfam Myb-like DNA-binding domain 140 185 IPR001005 -
Gma11g01991 323 SUPERFAMILY Homeodomain-like 134 188 IPR009057 -
Gma11g01991 323 SMART sant 29 81 IPR001005 -
Gma11g01991 323 SMART sant 137 187 IPR001005 -
Gma11g01991 323 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 136 188 IPR006447 GO:0003677
Gma11g01991 323 ProSiteProfiles Myb-like domain profile. 25 79 IPR001005 -
Gma11g01991 323 CDD SANT 32 78 IPR001005 -
Gma11g01991 323 MobiDBLite consensus disorder prediction 202 252 - -
Gma11g01991 323 PANTHER MYB TRANSCRIPTION FACTOR MYB51 1 297 - -
Gma11g01991 323 MobiDBLite consensus disorder prediction 196 252 - -
Gma11g01991 323 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 297 IPR043363 -
Gma11g01991 323 Gene3D - 139 189 - -
Gma11g01991 323 ProSiteProfiles SANT domain profile. 141 189 IPR017884 -
Gma11g01991 323 MobiDBLite consensus disorder prediction 120 140 - -
Gma11g01991 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 189 IPR017930 -
Gma11g01991 323 CDD SANT 140 185 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01991 Gma-Chr11 31755503 31757552 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma11g01991 Myb_DNA-binding 1.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01991 - - gmx:778181 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00613 18 6014645 6017075 Gma11g01991 11 31755503 31757552 GST