Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01984 ATGTGGATGCTAAACAAGCTCAGCTCCCCCTACGACGACACCGACCAGAAACTAGCCTCGTACTTCCTCCAAACCTTCTTCAGCCACATCACCCAAGCCGGGGATCGAACCTACAAAACCTTAGCTTCAGCTTCAAAGAAAACATGCTCCTTCAAATCAACCCGCAAAACATGCTCCTTCGTCACCGCCGGCACCACCGCACAGAAGGTCATGAAGGAAATCAAAGCCAGAATGGAGAAGGAGGCTGATTTGGACATTGGATTGGAAGGGTTTGAGTTCGTCAAAGGGTTTGAAGAGTGTTTGAGGTGGTTTAGGGTTTACTTTGAAGCCTTGGACAGGATTTTTCCGAGGACGAGCAACGAGCATTTGATGCTTGAGAGGGAGGCGGGGAGGGCAATGGTGGACCTGGTGGCGTGTTCTCTGGTAGAGTCTGTAGAGAGGTGGGGGGTTTGGGTTTTTTATGGTTCCACTGGAGGATAG 480 0.5062 MWMLNKLSSPYDDTDQKLASYFLQTFFSHITQAGDRTYKTLASASKKTCSFKSTRKTCSFVTAGTTAQKVMKEIKARMEKEADLDIGLEGFEFVKGFEECLRWFRVYFEALDRIFPRTSNEHLMLEREAGRAMVDLVACSLVESVERWGVWVFYGSTGG 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01984 159 PANTHER PROTEIN SHORT-ROOT 79 148 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Gma11g01984 159 PANTHER PROTEIN SHORT-ROOT 1 57 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Gma11g01984 159 Pfam GRAS domain family 73 147 IPR005202 -
Gma11g01984 159 ProSiteProfiles GRAS family profile. 1 159 IPR005202 -
Gma11g01984 159 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 57 IPR005202 -
Gma11g01984 159 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 79 148 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01984 Gma-Chr11 31000485 31000964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01984 1 57 GRAS Transcription Factor Family AT4G37650 62.712 1.05e-18 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g01984 GRAS 1.8e-08 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01984 - - gmx:100797072 127.487