Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01975 ATGAAGAAGATGATGCTGGAGATTCGGAAAAGCTTGCCAACTGTGCAGAAGAAAGCATGCATTCTCAGAAAGTTAATTCTTGGTTGTCGGAAGGTTTCATTTCCAAAGCTTCTAGAAGAAGTCAGTGACTATATTTCGGTGTTGAAGATGCAAGTACAAGCCATGAAGGCTCTCGTCGATGTCCTTGCCACTAGTGCTTCGTCGCCAGCTCCGATCGGTTTGAGCAAATGGAGTCAAACACAGGAGATGTCAACTAAAGCTCTTGGATATCACAAAGTAGTAGAAGAGAATAGGAAACTATACAACATGGTCCAAGATTTGAAAGTTGCCATTGTCTTGGTTCTTGTTGGAAGACTAAGAGAATTAAGAGTTGTTAATATTCTAACCATGGTTGTTGGGATCTTACAATACCCAGATACTTCTTATGGTGTTCCTTGCAATTGTTGGCAAGATTACATATGGACTAGCAAAGGAAGCTAA 480 0.4062 MKKMMLEIRKSLPTVQKKACILRKLILGCRKVSFPKLLEEVSDYISVLKMQVQAMKALVDVLATSASSPAPIGLSKWSQTQEMSTKALGYHKVVEENRKLYNMVQDLKVAIVLVLVGRLRELRVVNILTMVVGILQYPDTSYGVPCNCWQDYIWTSKGS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01975 159 PANTHER TRANSCRIPTION FACTOR BHLH150 8 74 - -
Gma11g01975 159 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 8 74 IPR044660 GO:0006355
Gma11g01975 159 CDD bHLH_AtIBH1_like 9 59 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01975 Gma-Chr11 30525517 30528380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01975 9 72 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 48.438 1.17e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01975 - - gmx:100802046 107.071