Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01969 ATGAAGAAAACACCAGCCCCCAGTTTGCATAAATCTAACCAAAGAAAAAAGAATGTTGGATTCCAAGATAGAGGTGCAGCCAATGGTACACAGAGTCACCATGTTGAGAGCCATTCTGCTCTGACATATTTCAAGTCTTCCTTCAAGAAATTTTTTACATTGTTTCTCTCTGGGAAGCGAAAAACAGACTCAGAAGCTGCTGAAAGTGATGACAGAAAGAATACACACAAAGTTAGAGGGGTATCATCTTCCACAGATGTATCATCTGATAGTTCCAAGAGTTCATCAAAAAGGGTGTTTTCTCATTGCTCTGCATCATCTGGCACTGCAAGTAGTAAGCTTGGAATGGGAAACTTCACCTTTGAGGAGATTTACAAGGCAACAGCAAAGTTCTCTCTAGAGAATAAGATTGGGGAAGGCGCGTTTGGAACAGTGTATAAGGGAAAGCTTAATGATGGAACCCTTGTGGCTGTAAAGCGTGCCAAGAAGGATTTACTAAACAAGAACTTAGCTGAGTTCAAGAATGAAATAAACACCTTGTCGAAAATTGAGCACATTAACCTTGTAAGGTGGTATGGATATTTGGAGCATGGACATGAAAAGATTATTGTTGTTGAATATATTAGTAATGGAACTCTTCGGGAACATTTAGATGGTATTCGGGGAGATGGACTAGAAATTGGTGAGCGTCTAGACATAGCAATTGACATAGCTCATGCAATTACTTACCTTCATATGTACACAGATCATCCAATTATTCATAGAGACGTCAAAGCATCAAATATCTTAATCACCGATAAACTAAGGGCCAAAGTTGCAGACTTCGGTTTTGCTCGGTTGGGACCAGAAGACCCTGGTGCAACCCATATTTCAACTCAAATTAAAGGAACAGCTGGTTACATGGATCCTGATTACATGCGAACGCGACATCTCTCCGAAAAGAGTGATGTTTATTCCTTCGGCGTGCTGCTTGTTGAAATGATGACAGGAAGATATCCAGTTGAACCACAGAGACCTCCCAATGAGAGAGTTACAATTAAATGGGCAATGCAGTTGTTGAGACAAAAAGAAGTTGTGATTGCCATGGATCCAAGATTGAGGAGAAATCCAACCTCCAACAAGGCAGTGCAAAAGGTTCTCAAGCTAGCTTTCCAATGCCTTGCACCGGTGAGACGATCACGACCATCTATGAAGAGTTGTGCAGAGGTTCTATGGGAGATTCGTAAAGATTTTAAAGAAAAAGCATTTTCTCATCCTCCTCACCATTCTGCAGATTTCCCTCAAAGAGATGCTAGGAAGAATAGACATAAGACATATGGTATTGAAGACAGTAAAGGCTATAAATTTGTATTTGCATAA 1359 0.404 MKKTPAPSLHKSNQRKKNVGFQDRGAANGTQSHHVESHSALTYFKSSFKKFFTLFLSGKRKTDSEAAESDDRKNTHKVRGVSSSTDVSSDSSKSSSKRVFSHCSASSGTASSKLGMGNFTFEEIYKATAKFSLENKIGEGAFGTVYKGKLNDGTLVAVKRAKKDLLNKNLAEFKNEINTLSKIEHINLVRWYGYLEHGHEKIIVVEYISNGTLREHLDGIRGDGLEIGERLDIAIDIAHAITYLHMYTDHPIIHRDVKASNILITDKLRAKVADFGFARLGPEDPGATHISTQIKGTAGYMDPDYMRTRHLSEKSDVYSFGVLLVEMMTGRYPVEPQRPPNERVTIKWAMQLLRQKEVVIAMDPRLRRNPTSNKAVQKVLKLAFQCLAPVRRSRPSMKSCAEVLWEIRKDFKEKAFSHPPHHSADFPQRDARKNRHKTYGIEDSKGYKFVFA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01969 452 Gene3D Transferase(Phosphotransferase) domain 1 208 425 - -
Gma11g01969 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Gma11g01969 452 SUPERFAMILY Protein kinase-like (PK-like) 113 408 IPR011009 -
Gma11g01969 452 PANTHER OS01G0253100 PROTEIN 1 442 IPR045271 GO:0004714|GO:0006468
Gma11g01969 452 SMART serkin_6 131 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01969 452 MobiDBLite consensus disorder prediction 63 96 - -
Gma11g01969 452 Gene3D Phosphorylase Kinase; domain 1 89 207 - -
Gma11g01969 452 ProSitePatterns Protein kinases ATP-binding region signature. 137 163 IPR017441 GO:0005524
Gma11g01969 452 MobiDBLite consensus disorder prediction 63 79 - -
Gma11g01969 452 MobiDBLite consensus disorder prediction 1 33 - -
Gma11g01969 452 PANTHER OS02G0821400 PROTEIN 1 442 - -
Gma11g01969 452 Pfam Protein tyrosine and serine/threonine kinase 132 404 IPR001245 GO:0004672|GO:0006468
Gma11g01969 452 MobiDBLite consensus disorder prediction 80 96 - -
Gma11g01969 452 ProSiteProfiles Protein kinase domain profile. 131 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01969 452 Coils Coil 156 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01969 Gma-Chr11 30035659 30039634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01969 110 407 Receptor kinase-like Gene Family AT1G30570 41.946 1.11e-65 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Gma11g01969 PK_Tyr_Ser-Thr 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01969 - - gmx:100819818 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01969 11 30035659 30039634 Gma11g01969 11 30035659 30039634 ECH
Gma18g00602 18 5922124 5925957 Gma11g01969 11 30035659 30039634 GST