Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01943 ATGAAGAAGCTCTCATCAACTTCTTCTTCTCATGCATCCCCTTCATCTTCATCCACCACAAGTTTGGACCCAACTATGTGCACCTCCAAAAGCGCAACTTCAGGGTGTCTCACTGCTATCTTGCGCAAAATTCTTTGCTCTGATGGCCTTCCAAGGGACCAAATTAGAGAACTTGATTCATCAAATGCAATGTTGAGTGACAAAGATCAAAACTTCAAGGCTAAacagaattcggagaccgatactgcttctactgctactaccactgctgctaccgttactactactactactactactcctggtatagtggcaagattaaTGGGTTTGGAATCAATTGAGATACCCTTTGGACCAAAACCAAGTTCACTTTCGCGCAGCAGATCCATGAATTCTGTGGAATATTTGGGAGCATACAATGGAATGGAGGAGGTTCTGCATAAGAGGGTTAAGTCCACATTGTCTTTTAGGGAGGCTCCAACTTTTCTTCTACATGAAAGTGAGAAGTTTTTGGAGCTGAGTTTCGAAGGTGGAGGTGGTAAGAGTAGAGAATTCAGATCCAACAGGAGAAAGAGGGAGCCTGTTTGTGCAGAATTGAAGCAGAACGTGCGATCAGAGAGAGGTGAATTGAGGGAAAACAAGAGAGAAAAAGTGTGTGATGAGAAGGTTTTGATTGAGAAGGGGAAACTTGGAAAGAAAAGGGTCTCTCATGTGTCTAGTGGGAGTGTTGGAAGTGGTGGTAAGCTTCAAGAAATCACCAACACTTTGCATCATTCCAAGGCTTCATCTGAAAAGAAGTGTTTTGATGATTCTGAAGCAGGGAAATTGTCACAGAACATGAAGGGCAAGGAAGTTGCAGTTGGTGAAAAGCAGAAGAGGAGGAGGAAAAAGAAGAAAACAATTTGTCAGAAAAAAAACAAGATAGAAGTTGAAACCAAATCAGAAGATTCAAGCCCAGTTTCTGTCCTTGATTTTGAGCGTGAAGCTTGTGCAACAGTTGGTTTGAGTTCAAGAAGAAAATTATCACCAAAGCTTGACAATGATCAGCACCTTCCTGTGCAATCTGATGGTAACTTGATGATTGATGAGAGTAAGGTTGAGGCAATTGACAACAACAAAGATGAAGGGTCAAAGAAAAAGGAGAAGAATGACCAGGAGTATATAGATATATGGGGTGAAGTTTGCAGAATAGTTGAAGATGAATTGGCTGAATCAAATAAGATACATATATGGACCAATAAACAAGGAGATTTAGGTAGCATAAGTGCAGATTTTGAGGCAGAAATTTTTGATAACTTGCTAAATGAGCTTGTGGATCAACTTGCTGGCATCCACTGA 1338 0.3782 MKKLSSTSSSHASPSSSSTTSLDPTMCTSKSATSGCLTAILRKILCSDGLPRDQIRELDSSNAMLSDKDQNFKAKQNSETDTASTATTTAATVTTTTTTTPGIVARLMGLESIEIPFGPKPSSLSRSRSMNSVEYLGAYNGMEEVLHKRVKSTLSFREAPTFLLHESEKFLELSFEGGGGKSREFRSNRRKREPVCAELKQNVRSERGELRENKREKVCDEKVLIEKGKLGKKRVSHVSSGSVGSGGKLQEITNTLHHSKASSEKKCFDDSEAGKLSQNMKGKEVAVGEKQKRRRKKKKTICQKKNKIEVETKSEDSSPVSVLDFEREACATVGLSSRRKLSPKLDNDQHLPVQSDGNLMIDESKVEAIDNNKDEGSKKKEKNDQEYIDIWGEVCRIVEDELAESNKIHIWTNKQGDLGSISADFEAEIFDNLLNELVDQLAGIH 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01943 445 PANTHER OS05G0128300 PROTEIN 1 443 - -
Gma11g01943 445 Coils Coil 196 216 - -
Gma11g01943 445 MobiDBLite consensus disorder prediction 366 382 - -
Gma11g01943 445 MobiDBLite consensus disorder prediction 1 26 - -
Gma11g01943 445 PANTHER - 1 443 - -
Gma11g01943 445 MobiDBLite consensus disorder prediction 278 302 - -
Gma11g01943 445 MobiDBLite consensus disorder prediction 341 382 - -
Gma11g01943 445 Pfam DUF761-associated sequence motif 99 113 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01943 Gma-Chr11 24983645 24985271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01943 29 442 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 27.123 9.29e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01943 - - gmx:102660191 771.541