Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01937 ATGGTTGTTCTGGAGTCCTCTCAAGTCTATGAGAGGACTACTATTGATTACTGGTTTGAACAATGCATCCAGGATGGTCGTGACCCCACTTGTTTGGTCACTAGCAGGGTTCTTAAGTCCTTGGAGCTGAAGCCGAATATTGGGTTGGCTGGGGAAATTGAAGAGTGGGTTGGAAGGGTTGTTGAATATCAAATCAAATCTATAGTGCAGTATCTGAGTGAGGAACCCTTGTCTGTTGATCATGTTGAGCATGCTCTGGATCCTGTTTATAAGGTTTCTTAA 282 0.4362 MVVLESSQVYERTTIDYWFEQCIQDGRDPTCLVTSRVLKSLELKPNIGLAGEIEEWVGRVVEYQIKSIVQYLSEEPLSVDHVEHALDPVYKVS 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01937 93 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 93 - -
Gma11g01937 93 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 93 - -
Gma11g01937 93 SUPERFAMILY RING/U-box 2 57 - -
Gma11g01937 93 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 75 IPR013083 -
Gma11g01937 93 Pfam U-box domain 2 57 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01937 Gma-Chr11 24848320 24848601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01937 2 59 U-box Gene Family AT1G76390 41.379 1.82e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01937 - - gmx:102659945 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00582 18 5685877 5693694 Gma11g01937 11 24848320 24848601 GST