Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01927 ATGCCAACCCAACCAGACTCACCACCCAACAACAACACGTTGACCCAAATGTTTCAGAACATCTTCTCAGACAACAGGAACATCATGCTTGCAGCCATCATTTCCCTCCTCTTAGTAATCCTCTTTGTCCTTCTTCTCCACCTCTACGCCAAGTGGTTCCTCGCTCAAGCACAGGCTCAGGCCAACGCCCGCCGCCGGAGGCGGCGCCGTCGCACGACGGTGACCGTCTCCGACGTCCTAGGCCCGGCAAGGTTCCACCACTTCCACAGCTTCACCATAGAAGACAGTTCACCCCTCTCAACAAAAGGGTTAGATTCTTCAACCATTAGAACAATTCCACTGTTCATCTATGAACACAACAACAACAACAACAAAAAGGTCCAGGAAGAAGAAGAAGAAGAACTTGAATGTGTGATTTGTTTGAGTGCATTTAAGAATGGTGAAGTGGGAAGGTGTTTGCCAAAGTGTGGCCATGGCTTCCATGTGGAGTGCATTGACATGTGGTTGAGTTCACACTCCAATTGTCCTATTTGTAGAACCTCAATTGTAGCAAGTATTGTGGAAAATAATTCTAGTGATGATCATCATGGTGGAGATCATCATGATTTGGTTGAGATTGTGACTGAAGGTGGTTCTGCTGCTCCAAGTTCTGAGACTAGAGAGGGTGAACATGGGAATAGAGGAGCAAGAACAACTGTTTCTGTTGTGTCAGAAAATTCTTCTTCTGAGTTCTTTGGATGCTCTTTGGAGAGAATGCTTGGCAAGGTTTTCCCAATATCAAGTAATGTAAATTAA 795 0.4566 MPTQPDSPPNNNTLTQMFQNIFSDNRNIMLAAIISLLLVILFVLLLHLYAKWFLAQAQAQANARRRRRRRRTTVTVSDVLGPARFHHFHSFTIEDSSPLSTKGLDSSTIRTIPLFIYEHNNNNNKKVQEEEEEELECVICLSAFKNGEVGRCLPKCGHGFHVECIDMWLSSHSNCPICRTSIVASIVENNSSDDHHGGDHHDLVEIVTEGGSAAPSSETREGEHGNRGARTTVSVVSENSSSEFFGCSLERMLGKVFPISSNVN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01927 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 184 IPR013083 -
Gma11g01927 264 CDD RING-H2_EL5_like 137 179 - -
Gma11g01927 264 Pfam Ring finger domain 136 179 IPR001841 -
Gma11g01927 264 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Gma11g01927 264 PANTHER - 1 263 - -
Gma11g01927 264 SUPERFAMILY RING/U-box 123 185 - -
Gma11g01927 264 MobiDBLite consensus disorder prediction 212 232 - -
Gma11g01927 264 SMART ring_2 137 178 IPR001841 -
Gma11g01927 264 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 1 263 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01927 Gma-Chr11 24625911 24626705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01927 27 187 Rapid Response to Elicitors AT3G16720 38.788 2.66e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01927 - - gmx:100816238 331.257