Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01922 ATGGCTTCTTCAGCTTTTTTATGTACGTGTTTCTGTTTTGCTTTTGTTGTGGCTTGCTTTGCTCGTGGCATCCCCTCAGATCTAAAAGAACCAAGAGACTTTGAAGAGCTACACAAGAACCCATCTTCCCCAGACCAGATTCCAGCACATGTTAAGTCTTCTTTCATGGAGAACTTtatagactatcatgTTCCAACTTCCCCCGTGTTCTCTTTCTATAACAACAACAACGTTAACTCTAATTCCATTCCCTCTACGACGCCGTCTTGCTCCTCTCCACCCTCCTCTCCCTTGTTGAAGAGAAGGAGGCCGGCCAAACTCGACATTCCCGTCGCTTCTCTCGCTTTTGGTCTCTCGCCGGCGGCGGCTCCATCTCCGGCGAGGGACGCCGTCGTGGAGGTCGACGGACGCGGGTTTTCCGTGTTCTGCAAACGAGGAAGGAGGCATCATATGGAGGATCGTTTCTCCGCTGCCGTTGATCTTCACGGTCAACCAAAACAGGCTTTTTTCGGGATATTTGATGGGCATGGGGGCACAAAGGCTTCGGAATTCGCTGCACATAACTTAGAAAAAAATGTGTTGGACGAGGTGGTTAGGAGAGACGAATGTGACATTAAGGAGGCAGTGAAGCATGGTTACCTTAACACAGATTCTGAATTCTTGAAGGAGGATCTTAATGGTGGTTCTTGCTGTGTAACAGCATTGATTAGGAACGGTAACCTTGTTGTTTCCAATGCTGGTGATTGTCGTGCTGTGATTAGCAGAGGGGATATGGCTGAAGCCCTAACATCTGATCACAAGCCTTCTAGGGAAGATGAAAGGGACAGAATTGAGACTCAGGGTGGCTATGTTGATGTGTGCCGTGGTGTTTGGAGGATACAAGGGTCATTGGCTGTTTCTAGGGGAATTGGAGATAGAAACCTGAAACAATGGGTCATAGCAGAACCTGAGACCAAAGTTATCAAAATTGAGCCTCAGCATGACTTGTTGATCTTAGCTTCAGATGGATTATGGGAAAAGGTTAGCAATCAGGAAGCAGTAGATATTGCTCGTCCTTTATGTGTAGGGAACAATAGACAACAACCATTGCTGGCTTGTAAGAAACTCGTGGAATTATCTGTGTCACGAGGCTCTCTGGATGACATAAGTGTTATGATTATCAAATTGCAAAACTATATTTGA 1182 0.4577 MASSAFLCTCFCFAFVVACFARGIPSDLKEPRDFEELHKNPSSPDQIPAHVKSSFMENFIDYHVPTSPVFSFYNNNNVNSNSIPSTTPSCSSPPSSPLLKRRRPAKLDIPVASLAFGLSPAAAPSPARDAVVEVDGRGFSVFCKRGRRHHMEDRFSAAVDLHGQPKQAFFGIFDGHGGTKASEFAAHNLEKNVLDEVVRRDECDIKEAVKHGYLNTDSEFLKEDLNGGSCCVTALIRNGNLVVSNAGDCRAVISRGDMAEALTSDHKPSREDERDRIETQGGYVDVCRGVWRIQGSLAVSRGIGDRNLKQWVIAEPETKVIKIEPQHDLLILASDGLWEKVSNQEAVDIARPLCVGNNRQQPLLACKKLVELSVSRGSLDDISVMIIKLQNYI 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01922 393 ProSitePatterns PPM-type phosphatase domain signature. 169 177 IPR000222 GO:0043169
Gma11g01922 393 Gene3D - 132 393 IPR036457 -
Gma11g01922 393 SMART PP2C_SIG_2 149 389 IPR001932 -
Gma11g01922 393 CDD PP2Cc 137 389 IPR001932 -
Gma11g01922 393 SUPERFAMILY PP2C-like 139 391 IPR036457 -
Gma11g01922 393 SMART PP2C_4 124 387 IPR001932 -
Gma11g01922 393 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 63 392 - -
Gma11g01922 393 ProSiteProfiles PPM-type phosphatase domain profile. 138 389 IPR001932 -
Gma11g01922 393 Pfam Protein phosphatase 2C 139 381 IPR001932 -
Gma11g01922 393 PANTHER PROTEIN PHOSPHATASE 2C 63 392 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01922 Gma-Chr11 24535350 24543773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01922 82 393 PP2C-type Phosphatase Gene Family AT2G30020 64.890 1.51e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01922 K17506 - gmx:100779913 585.874