Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma11g01919 | ATGGACATGGTCGATAATAATCAAAATAAGCAAAGACCAGGGTTTTCAAGAAAGCTTGGTGTCAATGAAAAAGTGGAGGTGAGGAGTGTGGATTTGGGGTTTCTAGGATCATGGCACCCTGCGACAGTTATACAGTGTGAGAAGCTGAAGCGGCATGTCAGATATAACAATGTTTTGGATGATAGTGGGGTGAATTATCTTGAGGAGGCAGTGAGTGTTTCAGAAGCTTTGGATGGTGATAATGAATGTTACAGCTACTCGCGTGGATCCATTAGGCCAATGCCTCCTTTGGTTGAGTTTGAGAGAGGGGACCTTAAGTTCGGTCTGTGTGTTGATGTGAACTATGAGGAAGCTTGGTGGGAAGGTGTTATATTCGACGACCACTGTGACGGAATGGAGAAGAGGAGTGTGTTTTTTCCCGACTTGGGTGATGAAATGCAAGTTGGAATTCATCAGTTGCGGATTACTCAGGACTGGCATGAAGTTACTGGGGAGTGGGAGCAGCGGGGGAACTGGGTGTTTCTTGATTTGGTTGAGGAGCAGAAGAGGAAATCGTTTGTTGCAGTTTCGGCTAAGCAGATTTGGTATGATGTACGCATAAAAAATGGATTTGAGAAGATTCGAGAGTGGACATGTAATATGAAGTACTTGTGGAGAAATCTGGTAATGGAGGTAATTAATGACTACTTATCTCTTACGGTAAATGAAGTTATCTTAGTGTTGAATCTTCCATGGAGTTTATTAAATGAAGCACCGGAGCCCGAATCTGTTGAAGCTATGGCTAGTGTTGACTTAAGCGTGACCTTTCCTGATAAGGAAATTGTTGTGCAGAAAGAACCAGTTCCTCCTGTTAAAGAGGTCTTACCCAAGTTGCAAAAAGAAATTGGCCCCTGTGGTGCTTTCTGGTCTGAAGAAAGTAGAGAAAATAAATCCTCAACTCATTTAAGGTCACACTATTGGAAACCTCTGAAGTTGTCTGAAGTTGCATTATGCCCTGATGCTGTTAGGGAATATCTACTTGCTCCCAACCGAGCAGATAAGGCATTGTGGATGGAAAAATTACAAAAACATCTTGTATGTCTTGGATGGAAAATTGAGTGGTCAAATAAAAATAATATTAAGCGTTACAGGTATAATGTTCCTGATAAGCAGGGCAAAAAGTTTTACCTTTCGCTCATTGAAGTTTGTAGAGATATGGAAAAGGACCCCGGCACAAACTCCTTGCAGCTCCAAAATGATCAGAGTATAGTTGATCCTACAGTAGACTGTCATCTTCCAGATGTGCCTCTTAATCCATCAGAAAATATTCAGAATCCAGATATCTTTCCTCCAACTATTTCATCTTCTCTGGTTGAAGATGAAGTTGAAGATGTACCTAAGTTTTGTCCTGAGGCTGTTGAGCAGTATTATCGCTCGTATATATCCAACATGAGTCGGGCTGATAAAAAACAATGGATACTGAAAGCAAAGAACCATTTGTTAGCCGAAGGATGGATTTTTGACTATCCACCTCCAACTAATAAGAAAAGGGGAATAATATACATTTCTCCACTAAATCGAAGATTCCCAACACTCCATGCAGCATGCAGATTTTGTATGGGAAAAAGTATTTCTAAATTGGCTAGGTCTGACATGAAACATTTAAATGTCTCAGGCATGAATGAAGAAAATGTTGATCAGGTTTGGAGCGGGGatctagtttgtagatcagctggaaatctagtttgtagatcagctggaaatcGAAAGCGAAAGAGCTTGGGGAATTCAAAGGCCAACATACCCAAGTGCCAAAGCAATGGATTGGCTCTACGGGTGCTAAGATCAAAAAAGAGGGCACAAAAGGTGTCTGCCCCTTCTCTTATAAATCATAAACCTCTGAATGTTCTGTCTTACTTGATAGACAACAGCATCATCTTACCAAGGTGTAAGGTTTATTATAAGGTGAAAGGCAGGCACCGTAAAGTCTGTACTTTGGCTGATGGGAAAATAACTCGTGATGGAATCAAGTGTAACTGTTGCATGGGAATATACAGTTTTGTTGGCTTTGAAAATCATGCTAGTGGTAGTAGTACTTGCAGACCCTCTGCTAGGATCTTTTTGGAAGATGGTAGATCACTATTAGATTGCCAGATAAAAATGATGCATGATCATAAGACAAGGGAAACTACTGGAAAATCATTCAGTGGTTTGTCTCTAGTTGAGAATGACTACATTTGTTCTGTTTGTCACTATGGTGGTGAACTTATTTTATGTGATAAATGCCCGTCTTCATTTCATAAGACATGTCTTGGTTTGGAGGACATCCCTAATGGTGACTGGTTTTGTCCATCATGTTGTTGTGGGATTTGTGGCCAAAGGAAAATTGACGGAGATGATGAGGTTGGACAATTACTTCCTTGCATTCAGTGTGAACATAAATATCATGTTAGGTGCCTGGAAAATGGAGCTGCAGATATATCAACAAGATATCTTGGAAATTGGTTCTGTGGAAAAGACTGTGAAAAGATATATGAGGGCCTTCATAAATTATTAGGAGAGCCAGTTTCGGTGGGTGTGGACAATCTAACTTGGACATTGGTGAAGTTTATCAACCCCGACAGTTGTGAACATGATAGTAGTAAAAGTGACTTATTGGCAGAAAGTTACAGCAAGCTCAATCTTGCTATTTCGGTGATGCATGAATGTTTTGAGCCCCTTAAGGAATCCTTAACAAACAGAGATCTTGTGGAAGATGTTATATTCAGCAGATGGTCAGAGCTAAACAGATTGAATTTCCAGGGTTTCTATACTGTGCTACTTGAGAGAAATGAAGAACTAATTAGTGTGGCAACTGTTAGGGTCTATGGGAAGAAGGTTGCTGAAATACCTCTTGTTGGTACCAGATTACAATATCGTCGACGTGGAATGTGTCACATTTTAatagaagagcttgaaaagAAGCTCAAGCAATTAGGGGTGGAGAGGCTTGTTTTACCTGCTGTTCCTAGTGTGCTAGAAACATGGACCCGCTCTTTTGGTTTTGCAAAGATGACTAATCTTGAGAGATCTCAATTTCTGGACTATACTTTCCTAGATTTTCAGGGTGCCATCATGTGTCAAAAGCTCTTGACGAATAATAATCCATCTCCGAATCCAGTCTTGTTAACAGAGTCACAAGCAAAATGTGATGTTTCTTCTGGAAGTTGCTGTGCTAACCTCAGTGAGTCTAGTCCAGTATGTGAATTATACCAAGTAGAAGAGATTGATCTAGGAGGGATGATGAATCATCAAATGGAGTATACTTGTGCTGGCAAAAATAATCAAGTTATTGGTGCTATTGACCTAGTCACCATTGTGGAGCAACCGAGTCCTGGGGATCAACAGTGCCAGAATGGAACAACCAGCTTAGAGTGCTCTATTGATAATAATGGCCTGTATAAGTGCGTCTACACGCGAAGGAAAGTGAGAAAGTCATGTGAAGGATTTAGCATGCCATCATGA | 3483 | 0.3988 | MDMVDNNQNKQRPGFSRKLGVNEKVEVRSVDLGFLGSWHPATVIQCEKLKRHVRYNNVLDDSGVNYLEEAVSVSEALDGDNECYSYSRGSIRPMPPLVEFERGDLKFGLCVDVNYEEAWWEGVIFDDHCDGMEKRSVFFPDLGDEMQVGIHQLRITQDWHEVTGEWEQRGNWVFLDLVEEQKRKSFVAVSAKQIWYDVRIKNGFEKIREWTCNMKYLWRNLVMEVINDYLSLTVNEVILVLNLPWSLLNEAPEPESVEAMASVDLSVTFPDKEIVVQKEPVPPVKEVLPKLQKEIGPCGAFWSEESRENKSSTHLRSHYWKPLKLSEVALCPDAVREYLLAPNRADKALWMEKLQKHLVCLGWKIEWSNKNNIKRYRYNVPDKQGKKFYLSLIEVCRDMEKDPGTNSLQLQNDQSIVDPTVDCHLPDVPLNPSENIQNPDIFPPTISSSLVEDEVEDVPKFCPEAVEQYYRSYISNMSRADKKQWILKAKNHLLAEGWIFDYPPPTNKKRGIIYISPLNRRFPTLHAACRFCMGKSISKLARSDMKHLNVSGMNEENVDQVWSGDLVCRSAGNLVCRSAGNRKRKSLGNSKANIPKCQSNGLALRVLRSKKRAQKVSAPSLINHKPLNVLSYLIDNSIILPRCKVYYKVKGRHRKVCTLADGKITRDGIKCNCCMGIYSFVGFENHASGSSTCRPSARIFLEDGRSLLDCQIKMMHDHKTRETTGKSFSGLSLVENDYICSVCHYGGELILCDKCPSSFHKTCLGLEDIPNGDWFCPSCCCGICGQRKIDGDDEVGQLLPCIQCEHKYHVRCLENGAADISTRYLGNWFCGKDCEKIYEGLHKLLGEPVSVGVDNLTWTLVKFINPDSCEHDSSKSDLLAESYSKLNLAISVMHECFEPLKESLTNRDLVEDVIFSRWSELNRLNFQGFYTVLLERNEELISVATVRVYGKKVAEIPLVGTRLQYRRRGMCHILIEELEKKLKQLGVERLVLPAVPSVLETWTRSFGFAKMTNLERSQFLDYTFLDFQGAIMCQKLLTNNNPSPNPVLLTESQAKCDVSSGSCCANLSESSPVCELYQVEEIDLGGMMNHQMEYTCAGKNNQVIGAIDLVTIVEQPSPGDQQCQNGTTSLECSIDNNGLYKCVYTRRKVRKSCEGFSMPS | 1160 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma11g01919 | 1160 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 876 | 1038 | IPR000182 | GO:0016407 | |
| Gma11g01919 | 1160 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 781 | 837 | IPR013083 | - | |
| Gma11g01919 | 1160 | SMART | agenet_At_2 | 103 | 161 | IPR014002 | - | |
| Gma11g01919 | 1160 | SMART | agenet_At_2 | 17 | 99 | IPR014002 | - | |
| Gma11g01919 | 1160 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 732 | 780 | IPR013083 | - | |
| Gma11g01919 | 1160 | PANTHER | AGENET DOMAIN-CONTAINING PROTEIN-RELATED | 5 | 1091 | - | - | |
| Gma11g01919 | 1160 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 917 | 1016 | IPR016181 | - | |
| Gma11g01919 | 1160 | SUPERFAMILY | FYVE/PHD zinc finger | 721 | 779 | IPR011011 | - | |
| Gma11g01919 | 1160 | Pfam | PHD-finger | 739 | 781 | IPR019787 | - | |
| Gma11g01919 | 1160 | Pfam | Tify domain binding domain | 662 | 713 | IPR032308 | - |
Showing 1 to 10 of 18 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma11g01919 | - | - | gmx:100814680 | 2373.2 |
Showing 1 to 1 of 1 entries