Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01918 ATGGATAACCTTAATAACACTCTGACACCTTTTGTAGTTAGGAAAGAGGTGAGGAGCATGACTATTAAGGCAACATATAAAGAAGATATCATAAGGTTTAAGGTCTCTATGGATTGTGGTATTGTGGAATTGAAAGAGGAAATTGCCAAAAGATTGAAACTAAAGGTGGGAACATTTGATATCAAGTATATGGATAGGGGTGGACCTCCAAGAGTGCATGGACATCTCAAGATCATCAGGCAGCAACATAATCAGGCTTGTGGTGCATGA 270 0.3889 MDNLNNTLTPFVVRKEVRSMTIKATYKEDIIRFKVSMDCGIVELKEEIAKRLKLKVGTFDIKYMDRGGPPRVHGHLKIIRQQHNQACGA 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01918 89 SUPERFAMILY CAD & PB1 domains 16 68 - -
Gma11g01918 89 Pfam PB1 domain 20 68 IPR000270 GO:0005515
Gma11g01918 89 Gene3D - 13 83 - -
Gma11g01918 89 PANTHER PROTEIN NLP8 2 65 IPR045012 GO:0003700
Gma11g01918 89 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 2 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01918 Gma-Chr11 24356552 24357746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01918 16 65 NLP Transcription Factor Family AT4G24020 66.000 7.31e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01918 - - gmx:100780901 122.094