Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01909 ATGTCTTGTTCCGTGGCAGTTCCAACTTCCCCCGTGTTCTCTTTCTACAACAACAACGTTAACTCTAATTCCATTCCCTCTACGACGCCGTCTTGCTCCTCTCCACCCTCCTCTCCCTTGTTGAAGAGAAGGAGACCGGCCAAACTCGACATTCCCGTCGCTTCTCTCGCTTTTGGTCTCTCGCCGGCGGCGGCGCCATCTCCGGCGAGGGACGCCGTCGTGGAGGTCGACGGACGCGGGTTTTCCGTGTTCTGCAAACGAGGAAGGAGGCATCATATGGAGGATCGTTTCTCCGCTGCCGTTGATCTTCACGGTCAACCAAAACAGGCTTTTTTCGGGATATTTGATGGGCATGGGGGCACAAAGGCTTCGGAATTCGCTGCACATAACTTAGAAAAAAATGTGTTGGACGAGGTGGTTAGGAGAGACGAATGTGACATTAAGGAGGCAGTGAAGCATGGTTACCTTAACACAGATTCTGAATTCTTGAAGGAGGATCTTAATGGTGGTTCTTGCTGTGTAACAGCATTGATTAGGAACGGTAACCTTGTTGTTTCCAATGCTGGTGATTGTCGTGCTGTGATTAGCAGAGGGGATATGGCTGAAGCCCTAACATCTGATCACAAGCCTTCTAGGGAAGATGAAAGGGACAGAATTGAGACTCAGGGTGGCTATGTTGATGTGTGCCGTGGTGTTTGGAGGATACAAGGGTCATTGGCTGTTTCTAGGGGAATTGGAGATAGAAACCTGAAACAATGGGTCATAGCAGAACCTGAGACCAAAGTTATCAAAATTGAGCCTCAGCATGACTTGTTGATCTTAGCTTCAGATGGATTATGGGAAAAGGTTAGCAATCAGGAAGCAGTAGATATTGCTCGTCCTTTATGTGTAGGGAACAATAGACAACAACCATTGCTGGCTTGTAAGAAACTCGTGGAATTATCTGTGTCACGAGGCTCTCTGGATGACATAAGTGTTATGATTATCAAATTGCAAAACTATATTTGA 1008 0.4722 MSCSVAVPTSPVFSFYNNNVNSNSIPSTTPSCSSPPSSPLLKRRRPAKLDIPVASLAFGLSPAAAPSPARDAVVEVDGRGFSVFCKRGRRHHMEDRFSAAVDLHGQPKQAFFGIFDGHGGTKASEFAAHNLEKNVLDEVVRRDECDIKEAVKHGYLNTDSEFLKEDLNGGSCCVTALIRNGNLVVSNAGDCRAVISRGDMAEALTSDHKPSREDERDRIETQGGYVDVCRGVWRIQGSLAVSRGIGDRNLKQWVIAEPETKVIKIEPQHDLLILASDGLWEKVSNQEAVDIARPLCVGNNRQQPLLACKKLVELSVSRGSLDDISVMIIKLQNYI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01909 335 SUPERFAMILY PP2C-like 81 333 IPR036457 -
Gma11g01909 335 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 3 334 - -
Gma11g01909 335 Pfam Protein phosphatase 2C 81 323 IPR001932 -
Gma11g01909 335 Gene3D - 74 335 IPR036457 -
Gma11g01909 335 CDD PP2Cc 79 331 IPR001932 -
Gma11g01909 335 ProSiteProfiles PPM-type phosphatase domain profile. 80 331 IPR001932 -
Gma11g01909 335 PANTHER PROTEIN PHOSPHATASE 2C 3 334 IPR015655 GO:0004722|GO:0006470
Gma11g01909 335 SMART PP2C_4 66 329 IPR001932 -
Gma11g01909 335 SMART PP2C_SIG_2 91 331 IPR001932 -
Gma11g01909 335 ProSitePatterns PPM-type phosphatase domain signature. 111 119 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01909 Gma-Chr11 24061180 24063036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01909 24 335 PP2C-type Phosphatase Gene Family AT2G30020 64.890 1.39e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01909 K17506 - gmx:100779913 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01909 11 24061180 24063036 Gma11g01909 11 24061180 24063036 ECH
Gma18g00573 18 5558314 5560499 Gma11g01909 11 24061180 24063036 GST
Gma11g01909 11 24061180 24063036 Gma14g01937 14 50128419 50130395 PCT
Gma11g01909 11 24061180 24063036 Gma02g02160 02 47452546 47454990 PCT
Gma14g01937 14 50128419 50130395 Gma11g01909 11 24061180 24063036 PCT
Gma02g02160 02 47452546 47454990 Gma11g01909 11 24061180 24063036 PCT