Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01903 ATGGGTTCTTCTTGGATAAGAGGGAAGTGCGTTGGTAAGGGCGCGTTTGGCACTGTCAGTGTCGCGCTTCGCAAACGTGACGATCAAACTCAAATTTTCGCGGTGAAGTCCGTGGATTTAAAAACGGGTCTCCCGGGTCAGCTGGAGGCGTTGGAGAACGAGATTCGGATCCTCCAGCGCATGTCTTCTCCGCACGTGGTAACTTTTCTCGGCGACGACGCCACGTGCGAGCAGCGGAACCTTCATATGGAGTACATGCCAGGTGGCACGCTCGCTGACCTGGATGCTGACGTGGACGAGATTTTAGTGAGACACTACACGTGGTGCCTTGTGAGCGCTCTGAAGCACTTGCACGCAAACGGCGTCGTTCACTGCGACGTGAAGGGAAAGAACGTTCTCGTCGGAGACGGAGGGAAAGGTTTCAATTGCAAGCTCGCTGACTTCGGATCGGCGGCGGAGTTCTCCAACGAAGGGTTTCCGGCAGTGGTGCCGCGCGGGAGTCCGCTGTGGATGGCGCCGGAGGTGGTTCGCCGGGAGTTGCAAGGTCCGGCGTCGGATGTTTGGTCGTTGGGATGCACGGTGATCGAGATGATCACCGGAAAACCGCCGTTGGAGGGGAACATCGTGGACACGCTGAACCGGATCGGGTTCTCCGGCGAGGTGCCGGAGTTTCCGAGGCGGTTGTCGGAGCTCGGAAGGGATTTTCTCGAGAAGTGTTTGAGAAGGGAAGCGTGGCGGCGGTGGAGCTGCGATCAGCTGCTGCAGCATCCGTTTTTGTTGCCGTGTGGTGAGATTGCGGAATCGTCGCCGCGGTGTGTTCTCGACCGAGTTGACTCGGAGTTCGCCGAGTTCGACCACGACGAAGAAGAAGAAGAAGAAACAATAACTGAAAATGAAAACTGGGCGAGGGGTAGAATTGGAAAATTGGCGATCAGGGAAATGGTAAATTGGGAAACAGAAGGTTGGGTGGTGGTGAGGGAATTGGCTTCCGACGCGGAACCGGCGGTGGCAGTTGACAGTTCTGAAGAAGTTAAAGACTTGACATGCCCGCGAAATATTCGGAAAGAGAGGGTAGAAAGGGGAATTCATTTAGGGACAAATTCGGAATTTAAAAATATAGAAAACGAAAGGCTCAGCAGTGGAGACAGGGCCTTGAAGCACTATCAAATTCTTCTTTGTAGCTCAGCAGTGGAGCCAAGCACATGCTGCCTCATTGGCCTCTTGAAGCACATTCTTTGA 1239 0.544 MGSSWIRGKCVGKGAFGTVSVALRKRDDQTQIFAVKSVDLKTGLPGQLEALENEIRILQRMSSPHVVTFLGDDATCEQRNLHMEYMPGGTLADLDADVDEILVRHYTWCLVSALKHLHANGVVHCDVKGKNVLVGDGGKGFNCKLADFGSAAEFSNEGFPAVVPRGSPLWMAPEVVRRELQGPASDVWSLGCTVIEMITGKPPLEGNIVDTLNRIGFSGEVPEFPRRLSELGRDFLEKCLRREAWRRWSCDQLLQHPFLLPCGEIAESSPRCVLDRVDSEFAEFDHDEEEEEETITENENWARGRIGKLAIREMVNWETEGWVVVRELASDAEPAVAVDSSEEVKDLTCPRNIRKERVERGIHLGTNSEFKNIENERLSSGDRALKHYQILLCSSAVEPSTCCLIGLLKHIL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01903 412 SMART serkin_6 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01903 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Gma11g01903 412 ProSitePatterns Protein kinases ATP-binding region signature. 11 36 IPR017441 GO:0005524
Gma11g01903 412 CDD STKc_MAPKKK 4 259 - -
Gma11g01903 412 SUPERFAMILY Protein kinase-like (PK-like) 4 276 IPR011009 -
Gma11g01903 412 Pfam Protein kinase domain 8 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01903 412 ProSiteProfiles Protein kinase domain profile. 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01903 412 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 351 - -
Gma11g01903 412 Gene3D Transferase(Phosphotransferase) domain 1 3 317 - -
Gma11g01903 412 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 3 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01903 Gma-Chr11 23999680 24002127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01903 5 333 MAP Kinase Kinase Kinase AT2G30040 58.997 3.58e-120 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma11g01903 Pkinase 8.9e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01903 - - gmx:100782609 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01903 11 23999680 24002127 Gma11g01903 11 23999680 24002127 ECH
Gma18g00572 18 5541056 5547513 Gma11g01903 11 23999680 24002127 GST
Gma11g01903 11 23999680 24002127 Gma14g01938 14 50154092 50155690 PCT
Gma11g01903 11 23999680 24002127 Gma02g02161 02 47467272 47471932 PCT
Gma14g01938 14 50154092 50155690 Gma11g01903 11 23999680 24002127 PCT
Gma02g02161 02 47467272 47471932 Gma11g01903 11 23999680 24002127 PCT