Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01887 ATGGAGTTCAACAAGTTCAGAATCAGAAGCTATGAGGGGCAATCTGATAGGGCTCAAGTGGAAGATCTTGAGAGAAGATGCGAGGTAGGGCCATCAGAAAGCGTGTTTCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATCCGGAACAGTCCCATGTACATGATGCTGGTGGCAGAGTTGGAAAATGAATTGGTTGGTGTCATTCAAGGGTCTATAAAAGTGGTCACGGTTCATGGTCACCCTCCAAAGGATTTGGCAAAGGTGGGGTATGTCCTTGGCCTAAGGGTATCACCTCACCACCGGAGAAAAGGGATTGGCTCAAGCCTTGTGAAAACCCTAGAAGAATGGTTCACTTCAAAAGATGTGGACTATGCATACATGGCAACAGAGAAAGACAACCATGCCTCAGTGAGTCTCTTCATGGACAAGTTTGGCTACATCAAGTTCAGGACTCCAGCTATTCTTGTCAACCCCGTGAACCATCATTGCTTTCAAATATCACCCAACATTGAGATAACAAGGTTGAAGGTGGACCAAGCTGAGTACTTCTATAGAAGATTCATGGGGTCCACAGAGTTCTTCCCAAATGACATAGGGAATATACTTAGGAACAAGCTAAGTTTGGGGACATGGGTGGCATATTTCAAAGGTGATATTGCTTGGGGTGATTTTGGGTCAGATATTGGACAAGTACCAAATAGTTGGGCTATGCTTAGTGTATGGAATAGTGGGGAGATATTCAAGTTAAGGCTAGGGAAAGCACCTTTTTCTTGCTTGGTATGCACCAAGAGTTGGTGGTTGATTGATAAGATTTTCCCATGTTTGAAATTGCCAACCATACCTGATTTCTTCAACCCATTTGGGTTCTATTTCATGTATGGGGTGCACCGTGAAGGGCCATTTTCAGGGAAGCTAGTGAGGGCCTTGTGCCAATTTGTGCACAACATGGGTGCTGAGTCCAAGGATGAGAGCAATTGCAAGATCATTGTGACTGAAGTTGAAGGAAGAGATGAACTCAACCACCATATCCCACATTGGAAATTGCTCTCATGCCAGGAGGACTTGTGGTGCATAAAGTCGTTGAAAAATATTGAAGGGACAAATAACAACTTCCATGAATTAACAACCAAAACCCCACCAACAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1182 0.4416 MEFNKFRIRSYEGQSDRAQVEDLERRCEVGPSESVFLFTDTMGDPICRIRNSPMYMMLVAELENELVGVIQGSIKVVTVHGHPPKDLAKVGYVLGLRVSPHHRRKGIGSSLVKTLEEWFTSKDVDYAYMATEKDNHASVSLFMDKFGYIKFRTPAILVNPVNHHCFQISPNIEITRLKVDQAEYFYRRFMGSTEFFPNDIGNILRNKLSLGTWVAYFKGDIAWGDFGSDIGQVPNSWAMLSVWNSGEIFKLRLGKAPFSCLVCTKSWWLIDKIFPCLKLPTIPDFFNPFGFYFMYGVHREGPFSGKLVRALCQFVHNMGAESKDESNCKIIVTEVEGRDELNHHIPHWKLLSCQEDLWCIKSLKNIEGTNNNFHELTTKTPPTRALFVDPREV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01887 393 Pfam Acetyltransferase (GNAT) family 47 148 IPR000182 GO:0016407
Gma11g01887 393 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 393 - -
Gma11g01887 393 Gene3D - 10 154 - -
Gma11g01887 393 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 162 IPR000182 GO:0016407
Gma11g01887 393 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 151 IPR016181 -
Gma11g01887 393 CDD NAT_SF 57 128 - -
Gma11g01887 393 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01887 Gma-Chr11 23405386 23407313 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gma11g01887 Acetyltransf_1 9.3e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01887 - - gmx:100802038 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01887 11 23405386 23407313 Gma11g01887 11 23405386 23407313 ECH
Gma11g01887 11 23405386 23407313 Gma02g02167 02 47559723 47561315 PCT
Gma02g02167 02 47559723 47561315 Gma11g01887 11 23405386 23407313 PCT