Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01881 ATGTCCAAATTTTGCTGCACTCAGTTAGGTGTCAGTCTTTCCACAATATATAGTGCCAAAGGAAAGCAAATTATAGTTTTTCTTGACTACGATGGAACTCTCTCTCCAATTGTTGCAGATCTAGATAAGGCTTTCATGACTAGAAAGACGAGAGCAACACTAAAGGGTATAGCAAGACATTTTCCCATAGCAATCGTGATCGGAAGGTGCAGAGACAAGGTATATAACTTTGTAAAATTGGCAGAACTTGGCATGGACATCACTGGTCCAACAAAAAGTCCAAAATCAACAGTGCTGTTCCAATCCACGAGTCAATTCCTGCCAATGATCGATGAGGTGTACAAGATCTTGTTAGAAAAAATGAAGACTGTCCCAGGGGCCCTAAGGTTGAGAACAATAAGTTTTAGTTGGGCAGCGTTGGCGGAGAAAGTTAGATTGGTGCTCAATGAGTATCCACAACTCAGGCTAACCCAAGGGAGAAAAGTGCTAGAGATCCATCCAACCATCAAATGGGACAAGGGCAAGGCTCTTGAATTTTTGTTAGAATCATTAGGGTACAAGAATTTGAATGATATATTTCCAATCTATATTGGTGATGATCGAACTGATGAGGATGCTTTTAGGGTAACAAATGCTGCCACGCCTAGCTTGCTAGTTAGTTAG 663 0.4103 MSKFCCTQLGVSLSTIYSAKGKQIIVFLDYDGTLSPIVADLDKAFMTRKTRATLKGIARHFPIAIVIGRCRDKVYNFVKLAELGMDITGPTKSPKSTVLFQSTSQFLPMIDEVYKILLEKMKTVPGALRLRTISFSWAALAEKVRLVLNEYPQLRLTQGRKVLEIHPTIKWDKGKALEFLLESLGYKNLNDIFPIYIGDDRTDEDAFRVTNAATPSLLVS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01881 220 SUPERFAMILY HAD-like 25 210 IPR036412 -
Gma11g01881 220 TIGRFAM T6PP: trehalose-phosphatase 22 211 IPR003337 GO:0003824|GO:0005992
Gma11g01881 220 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 16 210 IPR044651 GO:0004805|GO:0005992
Gma11g01881 220 Pfam Trehalose-phosphatase 27 127 IPR003337 GO:0003824|GO:0005992
Gma11g01881 220 Pfam Trehalose-phosphatase 134 212 IPR003337 GO:0003824|GO:0005992
Gma11g01881 220 Gene3D - 103 168 - -
Gma11g01881 220 Gene3D - 26 211 IPR023214 -
Gma11g01881 220 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE C-RELATED 16 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01881 Gma-Chr11 23080092 23081530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01881 20 219 Trehalose Biosynthesis Gene Families AT1G70290 24.123 8.19e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01881 K01087 - gmx:100802748 329.717