Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01860 ATGCTGCGTGAGCTAGGGTTAGGGTTTTTCCTCGTCGTTGTTCCGTTACTCCTTTCGCGGTTTTTTGGTTTTGACTTCGATCCTCTTCGCGATCGAGACGCTAATTCTTGGTTCTTCTTCCTGATTGCTTTTGTTCTTGTGCTCACGATCGCGTTTCGTCGCAGCTCATTACTGCACTATATGCTTCCAACTAAGAGACCTTGCGAAGGACTGGTTGCAGAAGAAGAGATCGACCACAACATCAACAACAACAACAACAGCAACAGCAGTTCTCTCAAGAAGAAACGGATTGCCGCCGGAACCGCCGATTCGACGGTGAAGAACGACGAAAGCACCGTCCGGAGCTTCAACAACAGCAACAGCAACAACAGCAGCAACAGCGGGGACGCGAGTGAAGGAGCGTCGGATATGGCTTTGGGCGAATCGAACCCGCCGGACATCGATGAGGATCTCCACAGCCGACAACTCGCCGTGTATGGGCGAGAGACCATGCGGAGGCTCTTCGGTTCCAACGTTCTCGTCTCCGGGATGCAGGGTGTTGGCGTCGAGATTGCGAAGAATCTCATTCTTGCTGGTGTCAAGTCCGTGACCTTGCATGATGAGGGGACTGTGGAGCTGTGGGATCTATCCAGTAACTTTGTGTTTTCAGAGAATGATGTTGGTAAAAACAGGGCAGCAGCTTCTGTTAGTAAGCTGCAGGAGCTCAACAATGCAGTGGTTGTACAAAGCTTGACTACTCAGCTGACTAAAGAGCACCTTTCCAATTTCCAAGCTGTTGTTTTTACTGATATCAGTCTTGAGAAAGCCTGTGAGTTCAATGATTACTGCCACAGTCATCAGCCTCATATTGCCTTTATTAAAACTGAAGTTAGAGGCCTTTTTGGTTCTGTGTTCTGTGATTTTGGGCCTGAGTTTACTGTTGTTGATGTGGATGGTGAAGAACCCCGTACTGGCATTATTGCATCCATAAACAATGACAACCCTGCTCTAGTATCCTGTGTTGATGATGAGAGGCTTGAGTTTCAGGATGGAGATCTTGTTGTATTCTCTGAAATTCATGGTATGAAAGAATTGAATGATGGAAAGCCAAGAAAGATAAAAAATGCTAGAGCATATTCTTTTACTCTTGAAGAAGACACCACAAATTATGGTATGTATGAGAAAGGTGGTATTGTCACGCAGGTCAAACAACCTAAGGTATTGAACTTTAAGCCACTCAGGGAAGCACTCAGTGATCCTGGCGATTTTCTTCTGAGTGATTTTTCGAAGTTTGATCGCCCACCTCTCCTTCACTTAGCTTTCCAGGCTTTGGATAAATTCATTTTTGAGTTAGGTCGCTTCCCTTTTGCTGGTTCAGAGGATGATGCACTGAAGTTTATATCTTTTGCTAGTTATATTAATGACAGCTTAGGGGATGGGAAATTAGAAGACATAAATCCAAAACTTTTGCGATACTTTGCCTTTGGTTCTAGGGCTGTATTGAATCCTATGGCTGCCGTGTTTGGTGGAATAGTTGGACAAGAGGTTGTCAAAGCATGCTCCGGGAAGTTTCATCCACTTTTTCAGTTCTTCTACTTCGACTCTGTGGAATCACTGCCTTCAGAACCATTGGACCCAAATGATTTCAGACCAGTAAATGGTCGTTATGATGCACAGATTTCAGTATTTGGACACAAATTGCAGAAGAAATTAGAGGATTCTAAAGTGTTTGTTGTTGGATCTGGTGCTTTGGGATGCGAATTTTTAAAAAATCTTGCTCTCATGGGAGTTTCTTGTGGAAGTCAGGGGAAGCTCACTATTACTGATGATGATGTGATAGAGAAGAGTAACTTAAGCAGACAGTTCCTTTTCCGTGATTGGAATATTGGACAGGCCAAGTCCACAGTTGCTGCTTCAGCTGCTGCAGCTATAAATCCTAGTTTTAATATTGAAGCTCTACAAAATCGGGTTGGTTCTGAAACTGAGAATGTGTTTAATGATACCTTCTGGGAAAACTTGAGTGTCGTTGTAAATGCACTGGACAACGTTAATGCAAGACTATATGTTGATCAGAGATGCTTGTATTTCCAAAAGCCTCTTCTTGAGTCTGGAACTCTGGGAGCCAAATGCAATACGCAGATGGTAATTCCCCACCTGACAGAAAACTATGGTGCATCAAGAGATCCACCTGAGAAACAGGCACCAATGTGCACTGTACACTCATTTCCACACAATATTGACCATTGCTTGACATGGGCGCGATCTGAGTTTGAGGGTTTGCTTGAGAAAACTCCAGCCGAAGTAAATGCATATTTGTCTAACCCAAGTGAATATACTAATGCAATGAAAAATGCTGGTGATGCTCAAGCAAGGGATAACTTGGAGCGTGTTCTTGAGTGCCTAGACCGGGAGAAGTGTGAAACTTTTGAAGATTGTATCACTTGGGCTCGGCTAAAGTTTGAGGATTATTTTGTTAACCGGGTGAAGCAGTTGATCTATACTTTTCCTGAAGATGCTGCAACTAGTACTGGAGCTCTGTTCTGGTCTGCACCAAAAAGATTCCCTCGTCCACTACAGTTCTCAGCGACTGATTTGGGTCATCTATATTTTGTGTTGTCAGCTTCTATTTTACGGGCAGAAACATTTGGTATCCCAATCCCTGACTGGGGTAAGAACCCTAGGAAGATGGCTGAAGCTGTTGATAGGGTGATAGTACCTGACTTTCAGCCTAAGAAAGATGTGAAAATAGTGACAGATGAGAAGGCCACCAGTCTCTCTACAGCTTCTATAGATGATGCAGCGGTTATTAATGATCTAGTAATCAAGTTAGAGAGGTGCCGGGCAAATCTTTCACCAGTGTTCAGGATGAAACCAATCCAATTTGAGAAGGATGATGACACAAACTACCATATGGATGTGATTGCTGGGCTTGCCAACATGAGGGCACGGAATTACAGCATTCCTGAGGTTGACAAGCTTAAAGCCAAGTTTATTGCTGGCCGGATCATTCCTGCAATTGCAACCTCGACTGCCATGGCAACTGGTCTTGTCTGCCTGGAACTCTACAAAGCTTTGGATGGAGGACACAAAGTCGAAGACTACAGAAACACATTTGCTAACTTGGCACTACCTCTGTTTTCAATGGCTGAACCAGTTCCACCGAAAATTATCAAGCATCAAGATATGAGTTGGACAGTTTGGGATAGATGGATTCTCGGAAACAATCCTACCCTCAGGGAACTTCTCGAGTGGCTGAAAGCAAAGGGCTTGAATGCTTATAGCATCTCTTGTGGAAGTTGCCTACTCTATAATAGCATGTTCCCTAGGCATAAGGATCGAATGGACAAAAAGGTTGCAGATCTGGCAAGGGATGTAGCCAAGTTGGAAATTCCTTCCTACCGTCGCCATTTGGATGTTGTTGTGGCATGCGAGGATGACGAGGATAATGACATCGACATCCCTCAGATATCCGTTTATTTCCGTTAG 3465 0.4418 MLRELGLGFFLVVVPLLLSRFFGFDFDPLRDRDANSWFFFLIAFVLVLTIAFRRSSLLHYMLPTKRPCEGLVAEEEIDHNINNNNNSNSSSLKKKRIAAGTADSTVKNDESTVRSFNNSNSNNSSNSGDASEGASDMALGESNPPDIDEDLHSRQLAVYGRETMRRLFGSNVLVSGMQGVGVEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSENDVGKNRAAASVSKLQELNNAVVVQSLTTQLTKEHLSNFQAVVFTDISLEKACEFNDYCHSHQPHIAFIKTEVRGLFGSVFCDFGPEFTVVDVDGEEPRTGIIASINNDNPALVSCVDDERLEFQDGDLVVFSEIHGMKELNDGKPRKIKNARAYSFTLEEDTTNYGMYEKGGIVTQVKQPKVLNFKPLREALSDPGDFLLSDFSKFDRPPLLHLAFQALDKFIFELGRFPFAGSEDDALKFISFASYINDSLGDGKLEDINPKLLRYFAFGSRAVLNPMAAVFGGIVGQEVVKACSGKFHPLFQFFYFDSVESLPSEPLDPNDFRPVNGRYDAQISVFGHKLQKKLEDSKVFVVGSGALGCEFLKNLALMGVSCGSQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAAAINPSFNIEALQNRVGSETENVFNDTFWENLSVVVNALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPSEYTNAMKNAGDAQARDNLERVLECLDREKCETFEDCITWARLKFEDYFVNRVKQLIYTFPEDAATSTGALFWSAPKRFPRPLQFSATDLGHLYFVLSASILRAETFGIPIPDWGKNPRKMAEAVDRVIVPDFQPKKDVKIVTDEKATSLSTASIDDAAVINDLVIKLERCRANLSPVFRMKPIQFEKDDDTNYHMDVIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALDGGHKVEDYRNTFANLALPLFSMAEPVPPKIIKHQDMSWTVWDRWILGNNPTLRELLEWLKAKGLNAYSISCGSCLLYNSMFPRHKDRMDKKVADLARDVAKLEIPSYRRHLDVVVACEDDEDNDIDIPQISVYFR 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01860 1154 MobiDBLite consensus disorder prediction 104 132 - -
Gma11g01860 1154 Pfam Ubiquitin-activating enzyme, SCCH domain 736 989 IPR019572 -
Gma11g01860 1154 Pfam Ubiquitin-activating enzyme E1 four-helix bundle 397 467 IPR032420 -
Gma11g01860 1154 MobiDBLite consensus disorder prediction 101 150 - -
Gma11g01860 1154 Gene3D - 271 559 - -
Gma11g01860 1154 SMART UBA_e1_C_a_2 1027 1149 IPR018965 -
Gma11g01860 1154 Gene3D - 721 996 IPR042063 -
Gma11g01860 1154 Gene3D - 314 395 IPR042302 -
Gma11g01860 1154 Pfam Ubiquitin-activating enzyme E1 FCCH domain 326 396 IPR032418 -
Gma11g01860 1154 Gene3D - 1062 1152 IPR038252 -
Gma11g01860 1154 CDD Ube1_repeat1 151 536 - -
Gma11g01860 1154 Gene3D - 143 260 IPR042449 -
Gma11g01860 1154 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 146 533 IPR035985 GO:0008641
Gma11g01860 1154 Pfam Ubiquitin fold domain 1060 1149 IPR018965 -
Gma11g01860 1154 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 129 1153 - -
Gma11g01860 1154 ProSitePatterns Ubiquitin-activating enzyme active site. 728 736 IPR033127 -
Gma11g01860 1154 CDD Ube1_repeat2 568 1107 - -
Gma11g01860 1154 TIGRFAM Ube1: ubiquitin-activating enzyme E1 146 1154 IPR018075 -
Gma11g01860 1154 Gene3D - 569 1047 - -
Gma11g01860 1154 PRINTS Ubiquitin-activating enzyme E1 signature 173 197 IPR000011 GO:0008641|GO:0036211
Gma11g01860 1154 PRINTS Ubiquitin-activating enzyme E1 signature 288 315 IPR000011 GO:0008641|GO:0036211
Gma11g01860 1154 PRINTS Ubiquitin-activating enzyme E1 signature 596 619 IPR000011 GO:0008641|GO:0036211
Gma11g01860 1154 PRINTS Ubiquitin-activating enzyme E1 signature 643 668 IPR000011 GO:0008641|GO:0036211
Gma11g01860 1154 PRINTS Ubiquitin-activating enzyme E1 signature 797 824 IPR000011 GO:0008641|GO:0036211
Gma11g01860 1154 ProSitePatterns Ubiquitin-activating enzyme signature 1. 511 519 IPR018074 -
Gma11g01860 1154 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 129 1153 IPR045886 -
Gma11g01860 1154 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 544 1044 IPR035985 GO:0008641
Gma11g01860 1154 Pfam ThiF family 152 531 IPR000594 -
Gma11g01860 1154 Pfam ThiF family 549 1044 IPR000594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01860 Gma-Chr11 21702725 21710076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01860 73 1154 EF-hand Containing Proteins AT2G30110 79.355 0.0 1781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01860 K03178 - gmx:100817492 2247.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01860 11 21702725 21710076 Gma11g01860 11 21702725 21710076 ECH
Gma18g00554 18 5259774 5276362 Gma11g01860 11 21702725 21710076 GST
Gma11g01860 11 21702725 21710076 Gma02g02172 02 47626480 47632721 PCT
Gma02g02172 02 47626480 47632721 Gma11g01860 11 21702725 21710076 PCT