Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01827 ATGACCACTTCTTTCTCTGACCTTCTTTCTTCTCCCACCTCCAATCACCACAATCTCGGAGGCTTCGAAAGACCTCATCATGAGTCCTACTCGTCGGATCAAACAGGTTCTTCAGGCGGTGTGCCAAAATTCAAGTCCACACCCCCTCCTTCTCTCCCTCTTAGCCATAATCATCCTCAAACACCAATATTTTCTCCTTCTTCTTACTTTAACATCCCTCATGGGTTAAGCCTCGCTGAACTTCTTGACTCCCCCGTTCTCCTTAACTCTTCCAACGTTCTGCCATCTCCAACAGCTGGATCATTTGGTGGTCAAGGCTTCAATTGGAAGAGCAGTTATGGGGAAAGCCAGCAGCATATCAAAGAAGAAGACAAAAGCTTCTCTAGTTTCTCCTTCCCAACACAAACACACCCTCCTCTTCCATCTTCAACTGGATTTCAATCTTCAACCGGCATAGTTCAAACCGGATGGAGTTTTCCAGAAACTGCTAAACAGGATGGTTTTGCTTCAAGAATAAGTATGAGCATGGTGAAAACTGAAACCACTTCTGCCATGCAGAGTTTGACCCCTGAGAATAATAACCACAGGAATGGTTTTCAATCAGATCATAAAAACTACCAACCACAACAAGTTCAGACCTTGAGCAGAAGATCAGATGATGGGTACAATTGGAGGAAATATGGGCAAAAGCAAGTGAAAGGAAGTGAAAATCCAAGAAGCTACTACAAGTGCACATACCCCAATTGTCCAACAAAGAAAAAAGTTGAGAAATCCTTAGATGGACAAATTACCGAGATAGTTTACAAAGGCACTCATAACCATCCCAAGCCTCAAGCTGCCAAGAGGAACTCATTGTCTGCCTCATCATCACTTGCAATTCCTCATTCAAATCATGGCAGCAATGAACTACCACATCATCAAATGGATTCGGTTGCCACTCCTGAAAATTCATCAATTTCAATGGATGATGATGATTTTGATCATACTAAATCAGGAGGAGATGAGTTTGATAATGATGAACCTGATGCCAAAAGATGGAGAATAGAAGGTGAAAATGAGGGTATATCAGCTGTAGGAAGTAGAACAGTGAGAGAACCCAGAGTTGTGGTTCAGACAACCAGTGACATCGATATTCTAGATGATGGATACAGGTGGAGGAAATATGGACAGAAAGTGGTCAAGGGAAATCCAAATCCAAGGAGTTACTACAAGTGCACATTCCCAGGATGTCCAGTGAGGAAGCACGTAGAGAGAGCCTCACAAGACCTAAGGGCAGTGATCACAACCTATGAGGGAAAACACAACCATGACGTGCCTGCAGCACGTGGCAGTGGCAACAACTCTATCAGTAGATCATTGCCAATAATAACCAATACAACAAACAACACCACTAGTGTAGCAACTTCTATCAGCACTAATAACAATTCTCTTCAGAGTCTTAGACCACCAGCTCCACCAGAAAGGCCATCATTATCACACTTCAACCCTAATATGCAGCACAGTTCAGGAAGCTTTGGATTCTCAGGGTTTGGAAATCCATTAATGGGGTCTTACATGAATCAACAATCTTACAATAATGTTTTCACCACCACTAGAGACAAGGAGGAGCCTGGAGATGACTCGTTTCTTGACTCTTTGCTATGTTAA 1647 0.4293 MTTSFSDLLSSPTSNHHNLGGFERPHHESYSSDQTGSSGGVPKFKSTPPPSLPLSHNHPQTPIFSPSSYFNIPHGLSLAELLDSPVLLNSSNVLPSPTAGSFGGQGFNWKSSYGESQQHIKEEDKSFSSFSFPTQTHPPLPSSTGFQSSTGIVQTGWSFPETAKQDGFASRISMSMVKTETTSAMQSLTPENNNHRNGFQSDHKNYQPQQVQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVEKSLDGQITEIVYKGTHNHPKPQAAKRNSLSASSSLAIPHSNHGSNELPHHQMDSVATPENSSISMDDDDFDHTKSGGDEFDNDEPDAKRWRIEGENEGISAVGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFPGCPVRKHVERASQDLRAVITTYEGKHNHDVPAARGSGNNSISRSLPIITNTTNNTTSVATSISTNNNSLQSLRPPAPPERPSLSHFNPNMQHSSGSFGFSGFGNPLMGSYMNQQSYNNVFTTTRDKEEPGDDSFLDSLLC 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01827 548 MobiDBLite consensus disorder prediction 180 218 - -
Gma11g01827 548 MobiDBLite consensus disorder prediction 127 147 - -
Gma11g01827 548 MobiDBLite consensus disorder prediction 180 223 - -
Gma11g01827 548 MobiDBLite consensus disorder prediction 113 147 - -
Gma11g01827 548 Gene3D WRKY domain 366 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma11g01827 548 ProSiteProfiles WRKY domain profile. 219 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma11g01827 548 MobiDBLite consensus disorder prediction 269 341 - -
Gma11g01827 548 MobiDBLite consensus disorder prediction 321 341 - -
Gma11g01827 548 Pfam WRKY DNA -binding domain 219 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma11g01827 548 Pfam WRKY DNA -binding domain 380 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma11g01827 548 SMART WRKY_cls 379 438 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma11g01827 548 SMART WRKY_cls 218 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma11g01827 548 MobiDBLite consensus disorder prediction 1 60 - -
Gma11g01827 548 MobiDBLite consensus disorder prediction 1 18 - -
Gma11g01827 548 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 31 516 - -
Gma11g01827 548 MobiDBLite consensus disorder prediction 473 492 - -
Gma11g01827 548 SUPERFAMILY WRKY DNA-binding domain 217 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma11g01827 548 MobiDBLite consensus disorder prediction 277 319 - -
Gma11g01827 548 Gene3D WRKY domain 205 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma11g01827 548 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 31 516 IPR044810 GO:0003700
Gma11g01827 548 ProSiteProfiles WRKY domain profile. 374 439 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma11g01827 548 SUPERFAMILY WRKY DNA-binding domain 371 439 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01827 Gma-Chr11 21057555 21061575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01827 216 445 WRKY Transcription Factor Family AT2G38470 66.802 5.04e-105 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma11g01827 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01827 K13424 - gmx:100127421 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01827 11 21057555 21061575 Gma11g01827 11 21057555 21061575 ECH
Gma18g00530 18 4998201 5001717 Gma11g01827 11 21057555 21061575 GST
Gma11g01827 11 21057555 21061575 Gma14g01974 14 50603541 50606495 PCT
Gma11g01827 11 21057555 21061575 Gma02g02195 02 47904878 47907873 PCT
Gma14g01974 14 50603541 50606495 Gma11g01827 11 21057555 21061575 PCT
Gma02g02195 02 47904878 47907873 Gma11g01827 11 21057555 21061575 PCT