Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01814 ATGCTAGCCCTGGCCTCGGTGTCATCTCTGTGGCCGCCAACCCCCTTCGTCACTGCCTCCTCCTCCCTCGGTAACTTCGTTCGCATCTTCGATGTCAATTCCAACGCCACCATTGCAACACTCGAGGCTCCTCCCTCTGAAGTTGAAGTTTCGCAAATGCACTTTGATCCCAAGAGAGAAATAACAGTGCAAGAAACAGAAATTGTGTGCTCTAAGGGCCCTCAAACACTTTGGTCTGCTAGGATATCAGGAAAAGTCACTGTTTTAGCTGGTAATGGAAATTTTTGGAGAGTTGGATGTGAAGATGGATGTCTGCAGATTTACACAAAGTGTGGGAGACGTGCAATGCCTACCATGATGATGGGTTCTGCAGCAACATTTGTAGACTCTCTCGAAGAAATCCGCGATCCAAATCAAGAACGTGTTGTACCAGAACATAACGGGCAAGATGGGCTCATAAAGCTCTTTGGCATGCTTCCTTGTGACACATGCATGAGGGAACATGCACACAACAAGAAATGCCCATATAATTTGCTTGTAGAATACTTTGAAGGGTTTTTTATTTCCCCAATTTCATCATGTTTTTACTTCTCTCTGTTCCCCTCCTCCGATGCTCTGGCGAGTCCATGTGGCGGCGGCGGAGGCAGCCATGAGAGCGGCGAACACAGTCCTCACTCCAATTTCCGCGAGCAGGACCGCTTCCTCCCTATCGCCAACATCAGCCGCATCATGAAGAAAGCGCTTCCTCCCAATGGGAAAATCGCCAAGGACGCCAAGGAAACTGTGCAGGAATGCGTCTTCGAGTTCATCAGCTTTGTCACCAGCGAGTACACTTCTTTGTTTCTCGCGTACGATTATGATACTTTCAACATGTACATCAAGCAGGTTGTGATTGAAGGTTTTAAGAGTTATCGAGAGCAAATTGCCACTAAGCCTTTCAGTTCTAAAGTTAATTGTGTTGCCATCCATTTTGTGTTAAGTGATCTCTTTCAAAACCTACACGGTGAAGATAGGCAGGCACTACTCCATATTGAGGGTGATTCAAAGGGTTCGGCCAAAAGGGTGGAGATGCATCTTAGATATTAG 1086 0.4678 MLALASVSSLWPPTPFVTASSSLGNFVRIFDVNSNATIATLEAPPSEVEVSQMHFDPKREITVQETEIVCSKGPQTLWSARISGKVTVLAGNGNFWRVGCEDGCLQIYTKCGRRAMPTMMMGSAATFVDSLEEIRDPNQERVVPEHNGQDGLIKLFGMLPCDTCMREHAHNKKCPYNLLVEYFEGFFISPISSCFYFSLFPSSDALASPCGGGGGSHESGEHSPHSNFREQDRFLPIANISRIMKKALPPNGKIAKDAKETVQECVFEFISFVTSEYTSLFLAYDYDTFNMYIKQVVIEGFKSYREQIATKPFSSKVNCVAIHFVLSDLFQNLHGEDRQALLHIEGDSKGSAKRVEMHLRY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01814 361 Gene3D - 5 130 IPR015943 GO:0005515
Gma11g01814 361 PANTHER PROTEIN HIRA 17 130 - -
Gma11g01814 361 SUPERFAMILY Histone-fold 231 276 IPR009072 GO:0046982
Gma11g01814 361 PANTHER MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS 17 130 IPR031120 GO:0005634|GO:0006325|GO:0006351
Gma11g01814 361 SUPERFAMILY WD40 repeat-like 14 109 IPR036322 GO:0005515
Gma11g01814 361 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 234 276 IPR003958 -
Gma11g01814 361 Gene3D Histone, subunit A 221 308 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01814 Gma-Chr11 20795814 20808040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01814 212 306 CCAAT-HAP3 Transcription Factor Family AT2G37060 60.606 2.89e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01814 K11293 - gmx:100806306 139.813