Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01813 ATGGGTTTACTCGAAGAACCGTCGTTGTATGTTTTGTTCGTAGTTGTCATTCAACAACGGTTGTTGCTAGGACCCGTCGTTGTAGACGTACAGACCATCGTCTTCGACCAAGAGCATTGTCTCCGACAAACACCATCTCCTCTCCGTCGTGTGTTGTTCTGTTTGCAGGCGCCGCCGACAAAGGTAAAGCCGCATTTTGGTCTTCTTTGTAGTCAAGTTCAAACAGGAAACTACGAGTGTGGATACTATGTTATGAATTGGATATGGTGCATTGTAAGTGGTGGATTGAAGGATGGCTGGATTGACGTAACTTCTGCTCAGGGTGGTGGTGACAAGGACTACAAGCTAGTAGGGGGACACATCAACCAAGCTGTGATGACCATGGCCTTCAACAGATCTTATTATAAGGATCATGTTCATCACTGTTTTGCTGCCAGTATTCCTACTTCTGCGGCTATAGGTTTGCACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATATAGCGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGGTGTGAGTGGGAACTTAGTTTTCGTTTGGGCATGCGTCCTTCGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTTGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGCCTCTGCTGATCTATCTTCAGATTTCTATGCATCAACATGCCCCAATGCCCTCTCTACCATAAAATCTGCAGTGAAAAGTGCAGTTGCTAAAGAGCGTCGCATGGGGGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTAATGGATGTGATGCATCAGTTCTTCTAGATGACACTTCGAGCTTCACGGGAGAAAAGTCAGCTGCTGCAAATTTGAATTCTTTAAGGGGTTTTGATGTAATTGACGACATCAAAAGTCAGTTGGAGAGTTCTTGTCCGGGGATTGTTTCCTGTGCAGATATTGTTGCTGTTGCTGCACGAGATTCTGTCGTAGCTTTGGGTGGTCCATCATGGACAATAGGGTTAGGCAGAAGAGATTCAACCGCTGCAAGTAAAGAGGCTGCCACTAGCGATATTCCATCCCCTCTAATGGACCTTAGTGATCTCATATCAGCTTTTTCAAATAAGGGGTTTACCTCCAAAGAGATGGTAGTCCTCTCAGGAGCTCATACAACAGGGCAAGCCAAATGCCAATTCTTCCGGGGTAGGATCTACAATGAGACCAACATTGATTCAGATTTTGCAACATCAGCCAAGTCAAATTGTCCAAGCACTGATGGTGACAGCAACCTCTCCCCACTAGATGTCACCACCAATGTGTTATTTGACAATGCTTATTTCAAGAACCTAGTCAACAAGAAAGGGCTTCTCCATTCTGATCAGCAACTTTTTAGTGGCGGTTCTACTGATTCTCAGGTCACTACCTACAGCACCAGCTCTTCAACTTTCTATGCAGACTTTGCCAGTGCCATGGTCAAAATGGGAAATCTCAGCCCTTTAACAGGAAGCAGTGGCCAAATTCGTACTAACTGCCGCAAAGTTAACTAA 1752 0.4469 MGLLEEPSLYVLFVVVIQQRLLLGPVVVDVQTIVFDQEHCLRQTPSPLRRVLFCLQAPPTKVKPHFGLLCSQVQTGNYECGYYVMNWIWCIVSGGLKDGWIDVTSAQGGGDKDYKLVGGHINQAVMTMAFNRSYYKDHVHHCFAASIPTSAAIGLHFYPIWEAASVDEWLYSGGPYELIVLHFLLGVACYMGCEWELSFRLGMRPSIAVAYSAPVAAATAVFLIYPIGQGSFSDGVAGVFGGSLFSAMHGSLVTSCLIRETTENESANEGYRFGQEEETYNIVAAHASADLSSDFYASTCPNALSTIKSAVKSAVAKERRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKSAAANLNSLRGFDVIDDIKSQLESSCPGIVSCADIVAVAARDSVVALGGPSWTIGLGRRDSTAASKEAATSDIPSPLMDLSDLISAFSNKGFTSKEMVVLSGAHTTGQAKCQFFRGRIYNETNIDSDFATSAKSNCPSTDGDSNLSPLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSSSTFYADFASAMVKMGNLSPLTGSSGQIRTNCRKVN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01813 583 ProSiteProfiles Plant heme peroxidase family profile. 290 583 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 Gene3D Peroxidase, domain 2 428 562 - -
Gma11g01813 583 Pfam Photosynthetic reaction centre protein 125 236 IPR000484 GO:0009772|GO:0019684|GO:0045156
Gma11g01813 583 Pfam Photosynthetic reaction centre protein 235 280 IPR000484 GO:0009772|GO:0019684|GO:0045156
Gma11g01813 583 PRINTS Haem peroxidase superfamily signature 322 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Haem peroxidase superfamily signature 503 518 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Haem peroxidase superfamily signature 450 465 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Haem peroxidase superfamily signature 384 401 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Haem peroxidase superfamily signature 402 414 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PANTHER PEROXIDASE 283 583 - -
Gma11g01813 583 SUPERFAMILY Heme-dependent peroxidases 290 583 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 SUPERFAMILY Bacterial photosystem II reaction centre, L and M subunits 131 301 IPR036854 GO:0009772|GO:0019684|GO:0045156
Gma11g01813 583 PANTHER PEROXIDASE 72-RELATED 283 583 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 Pfam Peroxidase 308 546 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Plant peroxidase signature 517 534 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Plant peroxidase signature 300 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Plant peroxidase signature 449 461 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Plant peroxidase signature 557 570 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Plant peroxidase signature 402 417 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Plant peroxidase signature 383 393 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Plant peroxidase signature 324 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Plant peroxidase signature 501 516 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 PRINTS Plant peroxidase signature 364 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01813 583 CDD secretory_peroxidase 291 582 IPR033905 GO:0004601|GO:0042744
Gma11g01813 583 ProSitePatterns Peroxidases active site signature. 322 333 IPR019794 GO:0004601
Gma11g01813 583 Gene3D - 114 243 IPR036854 GO:0009772|GO:0019684|GO:0045156
Gma11g01813 583 Gene3D - 294 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01813 Gma-Chr11 20775789 20785905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01813 289 583 Peroxidase AT5G05340 63.636 9.64e-137 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01813 K00430 - gmx:100811634 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01813 11 20775789 20785905 Gma11g01813 11 20775789 20785905 ECH
Gma11g01813 11 20775789 20785905 Gma02g02442 02 50572463 50574689 ECH
Gma11g01813 11 20775789 20785905 Gma14g00450 14 4315327 4317837 ECH
Gma18g00520 18 4893351 4895981 Gma11g01813 11 20775789 20785905 GST