Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01806 ATGGCACTTTCTCCTATTCGTTCTTCTACTTTCTCTTCATCATCAGCTATTGTTACATTAGCTGTGTTACTTCTTCTTACAAGGACCTCTTCAGCTACCCTCTCAAAGAACTTCTATTCTAAGACATGTCCAAACGTTTTCAACACGGTAAAATCTGTAGTAAAATCTGCTGTGGCCAAAGAACCTCGCATTGGAGCTTCTATTGTTCGCCTCTTCTTCCATGACTGCTTTGTTCAAGGTTGTGATGGATCAATACTACTTGATGACACTCCAACCTTCCAGGGGGAGAAGACTGCAGCTGCTAACAACAATTCAGTGAGAGGTTATGAATTAATCGATGATATCAAGTCTAAGGTCGAGAAAATATGCCCCGGTGTGGTCTCATGTGCTGATATCTTGGACATTGCTTCTCGTGACTCTGTTGTTCTTCTTGGAGGACCATTTTGGAATGTTAGACTTGGAAGAAGGGATTCTAGAAGTGCCAATTTCACTGCTGCAAACACTGGTGTTATTCCACCTCCCACATCTAACCTCACCAACCTTATCACAAGGTTTCAAGATCAAGGACTCTCTGCTAGGGACATGGTTGCCTTATCTGGAGCTCACACATTTGGCAAAGCAAGGTGTACTAGTTTCAGAGATCGCATATACAATCAAACCAACATTGACAGAACATTTGCATTGGCCAGGCAGAGGAGGTGCCCTAGGACCAATGGCACAGGTGACAACAATCTAGCAAATCTAGACTTCAGAACTCCAAATCATTTTGACAACAACTACTTCAAAAACCTTCTCATTAAAAGGGGACTCCTCAATTCTGATCAAGTGCTTTTCAATGGTGGATCCACTGATTCACTGGTCAGAACATACAGCCAGAATAACAAGGCCTTTGATTCTGACTTTGTTAAAGCAATGATTAGGATGGGAGATATCAAACCCTTAACTGGGTCACAAGGGGAGATTAGGAAGAACTGCAGGAGAGTGAATTAA 990 0.4232 MALSPIRSSTFSSSSAIVTLAVLLLLTRTSSATLSKNFYSKTCPNVFNTVKSVVKSAVAKEPRIGASIVRLFFHDCFVQGCDGSILLDDTPTFQGEKTAAANNNSVRGYELIDDIKSKVEKICPGVVSCADILDIASRDSVVLLGGPFWNVRLGRRDSRSANFTAANTGVIPPPTSNLTNLITRFQDQGLSARDMVALSGAHTFGKARCTSFRDRIYNQTNIDRTFALARQRRCPRTNGTGDNNLANLDFRTPNHFDNNYFKNLLIKRGLLNSDQVLFNGGSTDSLVRTYSQNNKAFDSDFVKAMIRMGDIKPLTGSQGEIRKNCRRVN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01806 329 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 SUPERFAMILY Heme-dependent peroxidases 34 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Gma11g01806 329 PANTHER PEROXIDASE 14 328 - -
Gma11g01806 329 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 Gene3D Peroxidase, domain 2 172 308 - -
Gma11g01806 329 Pfam Peroxidase 50 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 CDD secretory_peroxidase 34 328 IPR033905 GO:0004601|GO:0042744
Gma11g01806 329 Gene3D - 37 326 - -
Gma11g01806 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Gma11g01806 329 PANTHER PEROXIDASE 72-RELATED 14 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma11g01806 329 ProSiteProfiles Plant heme peroxidase family profile. 33 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01806 Gma-Chr11 20633497 20638441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01806 17 329 Peroxidase AT5G58390 64.537 8.97e-152 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01806 K00430 - gmx:100813250 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01806 11 20633497 20638441 Gma11g01806 11 20633497 20638441 ECH
Gma18g01952 18 52757201 52759718 Gma11g01806 11 20633497 20638441 ECH
Gma18g00517 18 4856109 4860637 Gma11g01806 11 20633497 20638441 GST
Gma11g01806 11 20633497 20638441 Gma14g01986 14 50800693 50805532 PCT
Gma11g01806 11 20633497 20638441 Gma02g02208 02 48068729 48073190 PCT
Gma14g01986 14 50800693 50805532 Gma11g01806 11 20633497 20638441 PCT
Gma02g02208 02 48068729 48073190 Gma11g01806 11 20633497 20638441 PCT