Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01803 ATGGAGAGTAAGCCACATGTCTTAATGCATAGATATGAGTTAGGAAGATTACTTGGCCAGGGAACCTTTGGAAAGGTTTACTATGCTAGGAGTACAATAACTAACCACAGTGTGGCTATTAAAGTGATTGACAAAGATAAGGTTATGAAAACTGGGCAAGCTGAACAAATCAAGCGTGAAATATCTGTTATGAGACTGGCCAGGCACCCCAATATTATACAGCTTTTCGAGGTTTTGGCTAACAAGAATAAGATTTACTTTGTTATAGAATGTGCTAAAGGTGGAGAGCTCTTCAACAAGGTGGCTAAAGGAAAACTCAAGGAAGATGTTGCACACAAGTATTTTAAGCAGCTAATCAATGCTGTAGACTATTGTCACAGTAGAGGTGTGTACCACCGAGACATTAAGCCCGAGAACATTCTATTGGATGAAAATGGGAATCTAAAGGTTTCTGACTTCGGTTTAAGCGCTCTCGTTGATTCCAAGAGGCAGGATGGCTTACTCCATACACCATGTGGCACACCTGCTTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGATATGATGGTACCAAAGCTGATATATGGTCTTGTGGAATAGTTCTGTTTGTCTTGTTGGCAGGTTATCTCCCTTTTCACGACCCAAATTTGATAGAGATGTATAGGAAGATAAGCAAAGCAGAATTGAAATGTCCTAATTGGTTCCCACAAGAAGTATGTGAGCTGTTGGGCATGATGTTAAATCCAAATCCTGACACTAGGATTCCCATATCTACTATTAGGGAAAATTGTTGGTTTAAGAAAGGACCAAATATAAAAAACAAAAGACCTGTAGTGGAAAATAGCACTGTCTCTTCTTCAAGTACAGTTCTTTCTGATCAAAATGACTGTGATGACATAGCAGCAGAAGCAAATGGGGAGTCAGTTGTGCCCTTAAGTATAAATGCCTTTGACATTATCTCCCGTTCTGTTGGTTTTGATCTTTCTCGATTCTTTGATGAAAGTTTTAAGAAAAAGGAAGCAAGATTTAGTTCAAGGTTACCAGCGAATGTCATCATCTCCAAGCTGGAAGACATTGCTAAGCAACTGAGGATGAAAATAAAGAAAAAAGCTGCTGGTTTGTTGAAATTAGAGAGCCTCAATGAAGGTAGGAAGGGAGTTTTATCCATTGATGCTGAGATCTTCGAGGTTATACCTTGTTTCCATATGGTGGAGGTGAAAAAATCAAATGGAGATACATTGGAATATCAAAAGATATTGAAAGAGGATATTAGGCCTTCTCTTCATGATATTGTTTGGGTCTGGCAAAGTGACCAACAACTGCAATCACAACAGTCAGAGCAACATCAACATACAGATGACCAGCAGCAACAACAACCACAGTCATAA 1389 0.3924 MESKPHVLMHRYELGRLLGQGTFGKVYYARSTITNHSVAIKVIDKDKVMKTGQAEQIKREISVMRLARHPNIIQLFEVLANKNKIYFVIECAKGGELFNKVAKGKLKEDVAHKYFKQLINAVDYCHSRGVYHRDIKPENILLDENGNLKVSDFGLSALVDSKRQDGLLHTPCGTPAYVAPEVIKRKGYDGTKADIWSCGIVLFVLLAGYLPFHDPNLIEMYRKISKAELKCPNWFPQEVCELLGMMLNPNPDTRIPISTIRENCWFKKGPNIKNKRPVVENSTVSSSSTVLSDQNDCDDIAAEANGESVVPLSINAFDIISRSVGFDLSRFFDESFKKKEARFSSRLPANVIISKLEDIAKQLRMKIKKKAAGLLKLESLNEGRKGVLSIDAEIFEVIPCFHMVEVKKSNGDTLEYQKILKEDIRPSLHDIVWVWQSDQQLQSQQSEQHQHTDDQQQQQPQS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01803 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Gma11g01803 462 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01803 462 SUPERFAMILY Protein kinase-like (PK-like) 8 297 IPR011009 -
Gma11g01803 462 Pfam NAF domain 311 369 IPR004041 GO:0007165
Gma11g01803 462 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 452 - -
Gma11g01803 462 MobiDBLite consensus disorder prediction 443 462 - -
Gma11g01803 462 CDD CIPK_C 315 428 - -
Gma11g01803 462 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Gma11g01803 462 Gene3D Transferase(Phosphotransferase) domain 1 4 311 - -
Gma11g01803 462 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Gma11g01803 462 Gene3D Kinase associated domain 1, KA1 312 434 - -
Gma11g01803 462 PANTHER - 2 452 - -
Gma11g01803 462 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01803 462 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01803 Gma-Chr11 20601470 20603223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01803 1 439 CBL-interacting serine-threonine protein kinases AT5G58380 64.823 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma11g01803 Pkinase 9.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01803 - K07198 gmx:100814847 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01803 11 20601470 20603223 Gma11g01803 11 20601470 20603223 ECH
Gma01g01347 01 46952275 46953672 Gma11g01803 11 20601470 20603223 ECH
Gma18g01960 18 52860853 52862851 Gma11g01803 11 20601470 20603223 ECH
Gma18g00514 18 4824851 4826239 Gma11g01803 11 20601470 20603223 GST
Gma11g01803 11 20601470 20603223 Gma02g02214 02 48131322 48134046 PCT
Gma02g02214 02 48131322 48134046 Gma11g01803 11 20601470 20603223 PCT