Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01799 ATGCCGGAGATCGGCCAGGCGGCGGTGGCTGCGGCGGCGGATGACACCGCCCTGTTCGGAAAATACGAGCTGGGCCGCATCCTCGGCTGCGGCGCCTTCGCCAAAGTCCACTACGCGCGCAACGTGCAAACGGGGCAGAGCGTGGCCGTGAAAATCATCAACAAAAAAAAACTCGCCGGAACTGGCCTCGCCGGAAACGTGAAGCGCGAAATCACGATCATGAGCAAGCTCCACCACCCCCACATCGTGCGCCTCCACGAGGTCCTCGCCACCAAGACCAAAATCTTCTTCATTATGGACTTCGTACGCGGCGGCGAGCTGTTCGGGAAAATCTCAAAGGGCCGATTCGCCGAGGATCTCAGCCGCAAATACTTTCATCAACTGATCTCCGCCGTGGGGTACTGCCACTCGCGCGGCGTATTCCACCGCGACCTCAAGCCGGAGAATCTCCTCCTCGACGAGAACGGCGATTTGAGGGTCTCGGATTTCGGGTTGAGTGCGGTTCGGGATCAGATCCGACCCGATGGCTTGCTCCACACGCTTTGCGGAACCCCTGCTTACGTGGCACCAGAGATTTTAGGCAAAAAAGGTTATGATGGTGCCAAGGTTGATGTGTGGTCATGCGGCGTCGTTTTGTTCGTGCTCGCCGCAGGTTACTTACCATTCAACGACCCGAATTTGATGGTAATGTATAGGAAAATCTACAAAGGCGAGTTCCGGTGTCCGCGGTGGATGTCGCCGGAGCTCCGGCGATTCATATCGAAGTTGCTCGACACGAACCCAGAAACGAGGATCACGGTGGATGGCATGACGCGGGACCCGTGGTTCAAAAAAGGGTATAAAGAATTGAAATTTCACGAAGAGGATTACCATGCATCCGGGTCGGGTTCGTTTTTCGGGCCGAAGGATGAGAGGGTGGTGAATTTGAACGCTTTTGATTTGATATCTTTTTCTTCGGGGTTGGATTTGTCCGGGATGTTTGGGGGGGAGTGGGGGGAGAGGTTGGTGACGCGGGAGCCGCCGGAGAGGGTTTTGGAGGCGGCGGAGGAGGCGGGGGCGGCGGCGGGGATGGCGGTGAGGTGGAAGAAGGAGTGTGGGGTGGAGTTGGAAGGATTTAATGGGAGGTTTGGGATTGGGGTGGAGGTTTACCGGCTCACGGCGGAGCTCGCGGTGGTGGAGGTAAGGAAGAGGGGAGGCGACGCCGCGGTGAGGGGTGTGTGGGAGGAGAGGTTGAAGCCATTGTTGCTTGGTGGTGCAACCACGTCGTATAGTAATAGTAGTGAGGATgaacaacaacatcaagaagaagaacaacaacatcaagaagaaaaacaGGAACAAGAACCTGAGTCGAAGGTTGCCTGTGAATGA 1371 0.5514 MPEIGQAAVAAAADDTALFGKYELGRILGCGAFAKVHYARNVQTGQSVAVKIINKKKLAGTGLAGNVKREITIMSKLHHPHIVRLHEVLATKTKIFFIMDFVRGGELFGKISKGRFAEDLSRKYFHQLISAVGYCHSRGVFHRDLKPENLLLDENGDLRVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILGKKGYDGAKVDVWSCGVVLFVLAAGYLPFNDPNLMVMYRKIYKGEFRCPRWMSPELRRFISKLLDTNPETRITVDGMTRDPWFKKGYKELKFHEEDYHASGSGSFFGPKDERVVNLNAFDLISFSSGLDLSGMFGGEWGERLVTREPPERVLEAAEEAGAAAGMAVRWKKECGVELEGFNGRFGIGVEVYRLTAELAVVEVRKRGGDAAVRGVWEERLKPLLLGGATTSYSNSSEDEQQHQEEEQQHQEEKQEQEPESKVACE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01799 456 MobiDBLite consensus disorder prediction 418 456 - -
Gma11g01799 456 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01799 456 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Gma11g01799 456 SUPERFAMILY Protein kinase-like (PK-like) 19 285 IPR011009 -
Gma11g01799 456 Gene3D Transferase(Phosphotransferase) domain 1 12 299 - -
Gma11g01799 456 MobiDBLite consensus disorder prediction 429 456 - -
Gma11g01799 456 Coils Coil 423 448 - -
Gma11g01799 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Gma11g01799 456 CDD CIPK_C 310 415 - -
Gma11g01799 456 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 442 - -
Gma11g01799 456 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01799 456 PANTHER - 1 442 - -
Gma11g01799 456 Pfam NAF domain 308 360 IPR004041 GO:0007165
Gma11g01799 456 Gene3D Kinase associated domain 1, KA1 305 417 - -
Gma11g01799 456 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01799 456 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01799 Gma-Chr11 20530612 20533246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01799 1 416 CBL-interacting serine-threonine protein kinases AT2G30360 62.763 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma11g01799 Pkinase 4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01799 - K12761 gsj:114377188 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01799 11 20530612 20533246 Gma11g01799 11 20530612 20533246 ECH
Gma18g00510 18 4798179 4800696 Gma11g01799 11 20530612 20533246 GST
Gma11g01799 11 20530612 20533246 Gma14g01995 14 50860473 50862481 PCT
Gma11g01799 11 20530612 20533246 Gma02g02217 02 48157418 48159330 PCT
Gma14g01995 14 50860473 50862481 Gma11g01799 11 20530612 20533246 PCT
Gma02g02217 02 48157418 48159330 Gma11g01799 11 20530612 20533246 PCT