Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01791 ATGGCTAGAAAGAAGTTGAATCTTACATACATACCCAATGACTCAAAGAGGAAGACAACATTGAAGAAAAGAAAGAATGGTTTGATGAAGAAGATGAATGAAATTAGCACTCTTTGTGGGATTGAAACATGTGCTATAATCTATAGTCCAAATGATCCTCAGCCAGAGGTTTGGCCATCTGACTCTGGAGTCCAAAGGGTGCTTTCAAGGTTCATGGAAATGCCTGAAGTGAGACAAAGCAGAAAGATGTTGAATCAGGAGAGCTTTTTGAGGCAAATGATCACCAAAGGCCAACAGCAGTTGACAAGACAAAGGAATGAAAACAGGAAGAAAGAGATGACCAATCTTATGCTTCAATACCTGACCGCTGGAAAGGTTGTTGGCAATCCTAGCTTGGTGGATTTGAATGATCTCTCATGGTTGATTGATCAGAACCTCAATGAAATAGAAAAGAAGATCACCATGCTCCAAATCCAAGAAGTGGTGATACCAGTGATTGAAAATGAAGGACACATGAATCATGTTCAAGGGCTGGAGAGCAACATGGACACCAAGAAAAAGCAACATTGA 570 0.4035 MARKKLNLTYIPNDSKRKTTLKKRKNGLMKKMNEISTLCGIETCAIIYSPNDPQPEVWPSDSGVQRVLSRFMEMPEVRQSRKMLNQESFLRQMITKGQQQLTRQRNENRKKEMTNLMLQYLTAGKVVGNPSLVDLNDLSWLIDQNLNEIEKKITMLQIQEVVIPVIENEGHMNHVQGLESNMDTKKKQH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01791 189 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 2 162 - -
Gma11g01791 189 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 52 IPR002100 GO:0003677|GO:0046983
Gma11g01791 189 SUPERFAMILY SRF-like 3 95 IPR036879 GO:0003677|GO:0046983
Gma11g01791 189 Gene3D - 13 96 IPR036879 GO:0003677|GO:0046983
Gma11g01791 189 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Gma11g01791 189 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Gma11g01791 189 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Gma11g01791 189 CDD MADS_SRF_like 2 85 IPR033897 GO:0000981|GO:0000987|GO:0045944
Gma11g01791 189 ProSiteProfiles MADS-box domain profile. 1 51 IPR002100 GO:0003677|GO:0046983
Gma11g01791 189 PANTHER MADS BOX PROTEIN 2 162 - -
Gma11g01791 189 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01791 Gma-Chr11 20380429 20381503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01791 1 157 Type I MADS-box Gene Family AT5G48670 54.140 1.04e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Gma11g01791 SRF-TF 6.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01791 - - gmx:100785964 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00500 18 4658095 4658868 Gma11g01791 11 20380429 20381503 GST