Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01789 ATGACACACAAGGAATTTTCCATTGCTCTAGTGACTCTCATTGCTGTTCTCTTTGTCAACATGAACATCCAAGGTGCCACTGCTGACTATGGTAGTTGGCAGAGTGCTCATGCCACTTTTTATGGCGGGGGTGATGCTTCTGGCACAATGGGTGGAGCATGTGGGTATGGAAATTTGTATAGCCAGGGCTATGGAACTGACACTGTGGCTCTAAGCACTGCTTTGTTCAACAATGGCTTAAGCTGTGGATCTTGCTATGAAATGAGATGTGATGATGACCCAAGATGGTGCAAACCTGGCTCCATTACTGTAACTGCCACTAACTTCTGCCCCCCAAACCCTTCTTTGCCTAACAACAATGGGGGTTGGTGCAACCCTCCTTTGCAACACTTTGATATGGCTGAACCTGCCTTCTTGCAAATTGCTGAATATAGAGCTGGAATTGTGCCTGTTGCCTTTAGGAGGGTTCCTTGTGTGAAAAAGGGGGGAATAAGGTTCACAATCAATGGCCACTCATACTTCAACCTAGTTTTGATCACCAATGTGGGTGGAGCTGGTGATGTGAATTCAGTGTCCATCAAAGGGTCCAAAACTGGGTGGCAACCCATGTCAAGGAATTGGGGGCAAAATTGGCAGAGCAACTCATACCTCAATGGACAATCCCTCTCTTTTCAAGTCACCACCAGTGATGGTAGAACTGTGACAAGCTTCAACGTGGCACCAGCCAATTGGCAATTTGGCCAGACCTTCCAAGGAGGCCAATACTAG 768 0.4714 MTHKEFSIALVTLIAVLFVNMNIQGATADYGSWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTDTVALSTALFNNGLSCGSCYEMRCDDDPRWCKPGSITVTATNFCPPNPSLPNNNGGWCNPPLQHFDMAEPAFLQIAEYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVNSVSIKGSKTGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVTSFNVAPANWQFGQTFQGGQY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01789 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 252 IPR007117 -
Gma11g01789 255 Gene3D - 18 158 IPR036908 -
Gma11g01789 255 PRINTS Expansin signature 63 77 IPR002963 GO:0009664
Gma11g01789 255 PRINTS Expansin signature 90 101 IPR002963 GO:0009664
Gma11g01789 255 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Gma11g01789 255 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Gma11g01789 255 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Gma11g01789 255 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Gma11g01789 255 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Gma11g01789 255 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Gma11g01789 255 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Gma11g01789 255 SUPERFAMILY Barwin-like endoglucanases 32 181 IPR036908 -
Gma11g01789 255 SMART dpbb_1 68 153 IPR007112 -
Gma11g01789 255 Pfam Lytic transglycolase 68 152 IPR009009 -
Gma11g01789 255 Gene3D - 163 255 IPR036749 -
Gma11g01789 255 PANTHER EXPANSIN-A15 4 255 IPR002963 GO:0009664
Gma11g01789 255 Pfam Expansin C-terminal domain 164 241 IPR007117 -
Gma11g01789 255 PANTHER EXPANSIN 4 255 - -
Gma11g01789 255 SUPERFAMILY PHL pollen allergen 160 252 IPR036749 -
Gma11g01789 255 PRINTS Expansin/Lol pI family signature 32 47 IPR007118 GO:0005576
Gma11g01789 255 PRINTS Expansin/Lol pI family signature 50 68 IPR007118 GO:0005576
Gma11g01789 255 PRINTS Expansin/Lol pI family signature 72 90 IPR007118 GO:0005576
Gma11g01789 255 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Gma11g01789 255 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Gma11g01789 255 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Gma11g01789 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 51 163 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01789 Gma-Chr11 20356751 20359423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01789 2 255 Expansin Gene Family AT2G40610 77.255 1.05e-148 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01789 - K20628 gmx:100499976 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01789 11 20356751 20359423 Gma11g01789 11 20356751 20359423 ECH