Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01788 ATGAAAACAGTATATAAAGCAATTGATGAGATACTTGGACTTCAAGTAGCATGGAGCCAGGTCAGACTCAACGAGGCACTTCGCAAACCAGAGGACTTGGAGCGGCTTTATTTAGAGATTCTACACCTCTTGGATGATGTTGACAACAAGACCTTCAATTTCATTACAGAGATGTTTACTTCAGGGACACTGATAGAGAAGAAATACAAGCACATAGGCCTACAAGCAATAAAGAGTTGGACTTGCCAAATCTTACAGGGTCTTGACCTCAAATGTGGTAACATTTTTGTTAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGTCTAGCAGCAATTCTCCATGGTTCTGAACCTGCTCACAGTGTTATAGGCACCCAAGAGTTCATGGCACCAGAATTCTATAAAGAAGAATACAATCAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTCTGGAAATGCTTACATCTGGTTATCCATATAGTGAATGTGCTAACCCTGCACAGATATACAAGAAAGTGACATCGAAGCACAAATGTTTATTGGCAAAATGTCTAATGACTGCAGCAAAGAGACCATCAGCAAAAGAATTGTTTAGTCATCCATTTCTTTTGTCTGATGATGCATCGTCCATGACAAAGATTGGAATTCAGAAACCCTTTTTAAATTACAATGAAATGGAAAAGCTTCAATTGAATGATGATTCACCTAGGACTGAAATGTCAATAACTGGGAAGCTAAATCCAGAACATCACAGTTTCTTTCTAAAAGTGCAAATTTCCGACAAGGATGGTTCTTGTAGGAATGTATATTTGCCCTTTGGCATATACAATGACACTCTAATTGATGATGCAATGGAGATGGTGAAGGAATTGGAGATCACAGATTTGAAGTCTTCTGATATTGCAAATATGattgaaggagagatAGATATTTTGATGCTACTAAATAAAAGGAATAGTAACTGTTCAAACACTAGCCATACATTCAATTATCACGATGACAACCACAACGAATGTCCTCGTCATCATTTCCACTCTGCCTCTTCTCGTTCATCATCCCAAGGATCAATATCAGGCTCAGTCAGTAGAGCTGATGGTTTATTGAATGAAGATTATTGGCTCCATG 1135 0.3806 MKTVYKAIDEILGLQVAWSQVRLNEALRKPEDLERLYLEILHLLDDVDNKTFNFITEMFTSGTLIEKKYKHIGLQAIKSWTCQILQGLDLKCGNIFVNGHLGQVKIGDLGLAAILHGSEPAHSVIGTQEFMAPEFYKEEYNQLVDVYSFGMCVLEMLTSGYPYSECANPAQIYKKVTSKHKCLLAKCLMTAAKRPSAKELFSHPFLLSDDASSMTKIGIQKPFLNYNEMEKLQLNDDSPRTEMSITGKLNPEHHSFFLKVQISDKDGSCRNVYLPFGIYNDTLIDDAMEMVKELEITDLKSSDIANMIEGEIDILMLLNKRNSNCSNTSHTFNYHDDNHNECPRHHFHSASSRSSSQGSISGSVSRADGLLNEDYWLH 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01788 378 PANTHER WNK KINASE 1 378 - -
Gma11g01788 378 MobiDBLite consensus disorder prediction 345 365 - -
Gma11g01788 378 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 378 - -
Gma11g01788 378 SUPERFAMILY Protein kinase-like (PK-like) 3 246 IPR011009 -
Gma11g01788 378 SMART serkin_6 3 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01788 378 Pfam Protein kinase domain 49 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01788 378 Gene3D Transferase(Phosphotransferase) domain 1 44 213 - -
Gma11g01788 378 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01788 378 MobiDBLite consensus disorder prediction 349 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01788 Gma-Chr11 20309820 20314494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01788 1 340 MAP Kinase Kinase Kinase AT3G51630 52.430 1.24e-125 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma11g01788 Pkinase 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01788 K08867 - gmx:100272208 705.286