Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01769 atgctttctttcaaagggagtccatactggatggcacccgaggttgtaatgaatacaaatggctatagtcttcctgttgatatatggagtttgggatgcacaattcttgaaatggcaacatcaaagcctccttggaatcagtatgaaggggtagctgcaatatttaaaattggtaacaacagagatatgcctgaaattCCTGAGATATGCCTCGGATCTTGGGTTCTTGAGCTCTCGTCTGAACAGCCTCAGAATCTGCTTCCCCAAATTGCCACCCACACCCCTCACTGCTTCTCCCTTCCCCACACCCCTCCCTATTGTTGCCAGTAA 330 0.2182 MLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWNQYEGVAAIFKIGNNRDMPEIPEICLGSWVLELSSEQPQNLLPQIATHTPHCFSLPHTPPYCCQ 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01769 109 PANTHER MAP KINASE KINASE KINASE 1 68 - -
Gma11g01769 109 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Gma11g01769 109 SUPERFAMILY Protein kinase-like (PK-like) 3 70 IPR011009 -
Gma11g01769 109 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01769 109 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 68 - -
Gma11g01769 109 Pfam Protein kinase domain 3 60 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01769 Gma-Chr11 19895047 19895677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01769 1 68 MAP Kinase Kinase Kinase AT1G53570 83.824 1.30e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma11g01769 Pkinase 5.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01769 K04421 - gmx:102660333 229.18