Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01757 ATGGCATTCGGCAACTACAAACAAAAGCAACAACAAGAAGAAGAAGAACAAGAACACAGAATGGAAGAAGACGAGGACGAAAGCGAAGAAGAAGAGGAACAATTTTGGGACGATTGGGAAGGAGAAGACGAAGAAGGAGAGCAGCGAGACTCTGAATTCGTGTGTCTCTTCTGTGAATCCCGGTACAGCTCGTGCGGTTCCTTGTTCGACCACTGCGCCTCCCTTCACCGCTTTGATTTCCACGCGATTAGAACAACTCTTAGCTTGGATTTCTATGCCTCCTTCAAGCTCATTAACTTCATCCGCTCTCTGGTGGCAGAGAACAGATGTTGGAGTTGTGGATTAACATGCCAGTCCAACCGTGATCTTCAGAATCATTTGCATGATTTAGTTGACTTTAATGAGATAAAGACTTTGTGGAATGATGATAGGTATCTGATACCTTTCATGGAAGATGATTCACTGTTGTACAGTTTTGGTGATTGTGACGAAGAAGGTGAAGATGAACAAATTACTCCAATTGATGAAGATCTTATAAAGGATCTAATGAACATTGAAGAGAGTATCCATGACGATCAAGATGTTGTGAATAAAATGGTAGTTGATGATGACAAACATGAGATTGCTTCTGTCTCTAATGATCATTTGAACAAGGCTAGTTCTTCAAAGGAACTTATTAATGGGAAGGACTTGTGCTGTGATAAGGATCCAGAAGGACATTTGATGGTTAATTCTCAAAATCACATTGCAAAGCATATTAAGAAGATCAATGAAAGTTATTTTGGCTCTTACAGTTCATTTGGTATCCATCGAGAGATGTTAAGTGACAAGGTGAGAATGGATGCTTATGGCCAAGCAATTTTGAAGAATCCGTCTCTACTAAATAGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGAATTCTCAGCCTATTTTCAGCAAAAGCTGGTGCTTCAAGGGTTATTGCAGTCGAGGCTAGTGCCAAGATGGCAGCAGTAGCATCTCAGATTGCAAAAGATAATGGTCTTTTGCTGAGTAAAAGCCAAAATGGAGTTGATGGCTTCCAAAAGGGAGTCATAGAAGTGGTTCATGGTATGGTTGAAGAGATTGATAAAACAGTTGAAGTTCAACCTCACAGTGTTGATGTACTGCTAAGTGAATGGATGGGATATTGCCTGCTGTATGAATCCATGCTTGGTTCAGTACTTTATGCACGAGACCGGTGGTTGAAGCCTGGCGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCCACAAGTCTTCCTTTTTGGGAAAATGTGTGTGATTTTGACATGTCTTGCATTGGGAAGGAGCTTGTCATAGATGCTGCCCGAATTCCTATAGTTGATGTTGTGGACTCTCAAGATTTAGTTACCTGTTCTGCTATTCTTCAGTCCTTTGACTTGGCAACCATGAAGCCTAATGAAGTGGATTTCACTGCAACTGCTACTTTGGAATTGAAACCAAGTTATTCAGGAACATGCTGCTGGTGTTATGGGGTTGTCCTATGGTTTGATACTGGATTTACAAGCAGATTTTGCCAAGAAACACCAGCTGTGTTATCCACATCCCCTTACATGCCAAGAACACATTGGTCACAGACAATCTTAACCTTTCGAGAACCTATTGCAATGGGATTTGGAAAAGGAAACAGGGGTAAACCAGAAGCAATCGGCACTGAGGTGTATCCTGCTACGAAGATTGATTTACGTGTCAGCATTGTGCGTTCTACTGAGCATCGCAGCATTGATATATCTTTAGAAGCTGCTGGTGTTGAACCTGATGGTCAGAAACGTAGTTGGCCTGCTCAGCTTTTTAATCTGCAGTAG 1872 0.4177 MAFGNYKQKQQQEEEEQEHRMEEDEDESEEEEEQFWDDWEGEDEEGEQRDSEFVCLFCESRYSSCGSLFDHCASLHRFDFHAIRTTLSLDFYASFKLINFIRSLVAENRCWSCGLTCQSNRDLQNHLHDLVDFNEIKTLWNDDRYLIPFMEDDSLLYSFGDCDEEGEDEQITPIDEDLIKDLMNIEESIHDDQDVVNKMVVDDDKHEIASVSNDHLNKASSSKELINGKDLCCDKDPEGHLMVNSQNHIAKHIKKINESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNSAVVMDVGCGTGILSLFSAKAGASRVIAVEASAKMAAVASQIAKDNGLLLSKSQNGVDGFQKGVIEVVHGMVEEIDKTVEVQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWENVCDFDMSCIGKELVIDAARIPIVDVVDSQDLVTCSAILQSFDLATMKPNEVDFTATATLELKPSYSGTCCWCYGVVLWFDTGFTSRFCQETPAVLSTSPYMPRTHWSQTILTFREPIAMGFGKGNRGKPEAIGTEVYPATKIDLRVSIVRSTEHRSIDISLEAAGVEPDGQKRSWPAQLFNLQ 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01757 623 SUPERFAMILY beta-beta-alpha zinc fingers 31 172 IPR036236 -
Gma11g01757 623 MobiDBLite consensus disorder prediction 1 42 - -
Gma11g01757 623 Pfam Methyltransferase domain 299 414 IPR041698 -
Gma11g01757 623 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 24 622 - -
Gma11g01757 623 Pfam C2H2 type zinc-finger (2 copies) 55 129 IPR041661 -
Gma11g01757 623 Coils Coil 7 34 - -
Gma11g01757 623 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 263 562 IPR029063 -
Gma11g01757 623 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 257 575 IPR025799 GO:0016274|GO:0018216
Gma11g01757 623 MobiDBLite consensus disorder prediction 17 42 - -
Gma11g01757 623 CDD AdoMet_MTases 299 417 - -
Gma11g01757 623 Gene3D - 420 618 - -
Gma11g01757 623 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 24 622 IPR025799 GO:0016274|GO:0018216
Gma11g01757 623 Gene3D Vaccinia Virus protein VP39 249 418 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01757 Gma-Chr11 19779951 19785482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01757 28 622 C2H2 Transcription Factor Family AT3G12270 56.661 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01757 K11436 - gmx:100778113 1164.83