Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01739 ATGCGCGAGGCAGCATGTTTGGACTTGATGGATCAGTATCAGGTAGGGAGACCTCCTGCGAAGCTCCATCAAGGATGCCTCAGTCACACAAAATTGAGGTTGGCAAGGCCGTATGTGTGTTCTGCTGGTAACTGTCAGGCATGTTACCGAAGGAAGGACCACCTGACTTGTCATCTTTTACAGCATCAAGGGAAGGTTTTTAAATGCCCTGTTGAGAGTTGCAACACTGAGTTCTCTTTGCAAAGCAATATGAAAGGACGTGTTGAGGAGACCCATGAGGACAGTTCTACCTCTACCAGTGACAAAAGTTACAAGCAGCATGCATGTCCTGAAACTGGCTGTGGGAAGGTTTTCAGATTTGCATTGCAGCTATGA 375 0.472 MREAACLDLMDQYQVGRPPAKLHQGCLSHTKLRLARPYVCSAGNCQACYRRKDHLTCHLLQHQGKVFKCPVESCNTEFSLQSNMKGRVEETHEDSSTSTSDKSYKQHACPETGCGKVFRFALQL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01739 124 PANTHER ZINC FINGER PROTEIN 19 124 - -
Gma11g01739 124 SUPERFAMILY beta-beta-alpha zinc fingers 36 65 IPR036236 -
Gma11g01739 124 ProSitePatterns Zinc finger C2H2 type domain signature. 40 62 IPR013087 -
Gma11g01739 124 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 67 IPR013087 -
Gma11g01739 124 PANTHER ZINC FINGER PROTEIN 423 HOMOLOG 19 124 - -
Gma11g01739 124 Gene3D Classic Zinc Finger 30 124 - -
Gma11g01739 124 MobiDBLite consensus disorder prediction 82 102 - -
Gma11g01739 124 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01739 Gma-Chr11 19362873 19363346 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01739 34 96 C2H2 Transcription Factor Family AT1G72050 47.619 1.62e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma11g01739 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01739 K09191 - gsj:114375085 174.096