Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01721 ATGACGACACCATCATTGGTAGAGTCTCTAGTTCTTCAACTCCATGAGATCTCAGCTGTCAAATTTGGCAACTTCAAGCTCAAATCTGGCATCTTCTCACCAATCTACATAGACCTCCGCCTCATCATATCTTACCCTTCTCTCCTCCAACAGATCTCTCAAACCCTTATTTCTTCAGTCTCTTCCACTTCCTTTGACCTCGTATGCGGTGTCCCTTACACTGCCTTACCCATTGCTACATGTGTCTCTCTTGCTCAGAACATTCCCATGGTCATGCGCCGCAAAGAAATCAAAGATTATGGCACTGCTAAAGCTATTGAAGGCGATTTCAAGCCTGGCCAAAGTTGCTTAATCATTGAGGATTTGGTTACCAGTGGCACGTCAGTTTTGGAAACTGCGGCGCCATTGCGTGCTGTGGGATTAAAGATCAGTGATGCTGTTGTGTTGATCGATAGAGAGCAAGGTGGCAGAGAAAACTTGGAGGAGAATGGCATCAAGCTGCATGCAATTATTAAATTGACTGAAATGGTGAAAATTTTGGGCAATCACGGGAAGCTTGATGAAGAGATGGTAGGGGTTGTTACGAAGTTCTTAGAGGATAATCGTAAGGTTGCTGCTTTGGCAAAGGTGGAGAAGCCTGTAACTAAGGTCAAAGCTTTGCCATTTGGGGAGAGGGCTAAGCTGTCGAAGAATCCAATGGGAAAGAGGTTGTTTGAGATAATGGCTGAGAAGGAGAGTAATCTATGTTTGGCTGCTGATGTTGGAACTGCAGCTGAATTGCTTGAAATTGCTGAGAAGGTAGTTGGACCTGAGATATGCTTGCTGAAGACTCATGTGGATATTTTTCCAGATTTTACTGCTGATTTTGGCTCTAAGCTTCTCTCGATTGCAGAAAAACATAACTTCTTAATCTTTGAGGATCGTAAATTTGCTGATATTGGCAACACAGTGACCATGCAATATGAAGGAGGGGTTTTTCGTATATTGGATTGGGCTCATATAGTAAATGCTCACATAATCTCAGGTCCTGGAATTGTTGATGGATTAAAATTGAAGGGTTTACCTCGTGGTAGGGGTCTATTACTGCTTGCTGAAATGAGCTCAGCTGGTAACCTTGCCAAGGGAGATTATACAACTTCTGCAGTAAAAATTGCTGAGGATCATTCTGACTTTGTAATTGGCTTCATCTCAGTCAATCCTGCATCATGGCCAGGGGCACCAATAAATCCTTCTTTCATTCAGGCAACCCCTGGAGTTCAAATGGTAACTGGTGGCGATGCTTTAGGGCAGCAATATAACACTCCATATTCTGTGATCCATGATAGGGGCAGTGACATCATCATCGTGGGACGTGGCATCATCAAAGCAGCAAACCCTGCTGAGATAGCTCGTGAATATCGTCTTCAAGGATGGAATGCATATTTGGCTAAATATTTGGTGTTATTTTTCAACGTAGTATCGGTGGCGGGTATCTCGGATTTAAAAGCGAAAATGCCGGATGTTCAAGCCCTTGTTAATGATTTTGTGAATCTGCTTAAGAAACGTAGAATTGAAGGGTCTCAAGCCACAGCAAAGCAGACAGCAGTGTTGCTACGCTCGGTGATTTCACAGCAGCGGGTGCCACACACAAACCAGGCCACAGTTCTGATTAATGCAGTAAGGGCGGTGGGGGAGCAAATTATTGATGTTAATCCTATTGAGTTAGCTGTGGGAAATATCGTGAGGCGTGTTTTGCACATTATAAGGGAGGAGGATCTTTCCCTTGTGACAGATGCTGTGGCTGGTTTTGGGATGTTTGCTGGAAGTGATGATGAGGATGATGTTGAGCGAGATGATTATCCTGCTTTATCCGCGGCTTCTGTTGCAGCTGCTGCAAGAAGCACCTCGCGTCCACCGTCATTGCAAACTCTTCTTGAGGATGTGACTGATTCAGCTGTTGTTCCACCAACACCTTCATCAGGCGGTGACTCTGAAGGGATAAGTAGAACTCTTGAAAAAGGTTCAAGTGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTCAATGAACTCATCCAAGACATAACCTCTTGCCATGAACAAATAGCAGAGCAGGCAGTAGAACATATTCATCAAAATGAGGTAATATTAACACTAGGTAGTTCAAAAACAGTGTTGGAATTTCTTTGTGCTGCAAAGGAGAAAAAGAGATCATTTAAGGTCGTTGTTGCTGAAGGTGCCCCAAGATATCAGGGACAAGTCCTTGCAAAAGAATTGGCTGCTAGAGGCATACAGACCACAGTAATTGCTGATTCTGCGACTTTTGCTATGATTTCCCAAGTGAATATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAACGGTGGAGTAATTGCCCCGATAGGGTTACATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGGAGTCACAAGTTGTGCCCTTTGTATCCACACAATCCTCAAGTCCTACTGACTGAGCTGAGATCCCCATCTGAGCTTCTTGACTTTGGGGAATTCTCAGATTTGATGGATTCTGCAACTGGTTCTGGTTCTCTTCATGTTGTTAACCCAGCATTTGATTATGTGCCACCAAACCTTGTTAGTCTCTTTATTACTGACACTGGAGGGCATAACCCGTCATATATGTACCGGCTCATAGCTGATTACTACTCCGCTGATGATTTGGTAGTGAAACAAAGAGCTACTACAGGGAGTTGA 2739 0.4399 MTTPSLVESLVLQLHEISAVKFGNFKLKSGIFSPIYIDLRLIISYPSLLQQISQTLISSVSSTSFDLVCGVPYTALPIATCVSLAQNIPMVMRRKEIKDYGTAKAIEGDFKPGQSCLIIEDLVTSGTSVLETAAPLRAVGLKISDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKILGNHGKLDEEMVGVVTKFLEDNRKVAALAKVEKPVTKVKALPFGERAKLSKNPMGKRLFEIMAEKESNLCLAADVGTAAELLEIAEKVVGPEICLLKTHVDIFPDFTADFGSKLLSIAEKHNFLIFEDRKFADIGNTVTMQYEGGVFRILDWAHIVNAHIISGPGIVDGLKLKGLPRGRGLLLLAEMSSAGNLAKGDYTTSAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQMVTGGDALGQQYNTPYSVIHDRGSDIIIVGRGIIKAANPAEIAREYRLQGWNAYLAKYLVLFFNVVSVAGISDLKAKMPDVQALVNDFVNLLKKRRIEGSQATAKQTAVLLRSVISQQRVPHTNQATVLINAVRAVGEQIIDVNPIELAVGNIVRRVLHIIREEDLSLVTDAVAGFGMFAGSDDEDDVERDDYPALSAASVAAAARSTSRPPSLQTLLEDVTDSAVVPPTPSSGGDSEGISRTLEKGSSGRKLKHDVIEAVNELIQDITSCHEQIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKEKKRSFKVVVAEGAPRYQGQVLAKELAARGIQTTVIADSATFAMISQVNMVIVGAHAVMANGGVIAPIGLHMVALAAQRHAVPFVVLAGSHKLCPLYPHNPQVLLTELRSPSELLDFGEFSDLMDSATGSGSLHVVNPAFDYVPPNLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKQRATTGS 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01721 912 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 234 IPR023031 GO:0004588|GO:0006221
Gma11g01721 912 Pfam Initiation factor 2 subunit family 517 886 IPR000649 GO:0044237
Gma11g01721 912 Pfam Phosphoribosyl transferase domain 56 158 IPR000836 -
Gma11g01721 912 SUPERFAMILY PRTase-like 5 198 IPR029057 -
Gma11g01721 912 CDD PRTases_typeI 65 172 IPR000836 -
Gma11g01721 912 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 304 317 IPR018089 GO:0004590|GO:0006207
Gma11g01721 912 Gene3D - 3 211 IPR029057 -
Gma11g01721 912 SMART OMPdecase_2 247 466 IPR001754 GO:0004590|GO:0006207
Gma11g01721 912 Gene3D - 691 896 IPR042529 -
Gma11g01721 912 PANTHER PHOSPHORIBOSYLTRANSFERASE, OROTIDINE 5-PHOSPHATE DECARBOXYLASE 7 477 - -
Gma11g01721 912 Gene3D Aldolase class I 217 479 IPR013785 -
Gma11g01721 912 MobiDBLite consensus disorder prediction 630 664 - -
Gma11g01721 912 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 246 466 IPR001754 GO:0004590|GO:0006207
Gma11g01721 912 SUPERFAMILY NagB/RpiA/CoA transferase-like 503 901 IPR037171 -
Gma11g01721 912 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 7 477 - -
Gma11g01721 912 CDD OMP_decarboxylase_like 248 466 - -
Gma11g01721 912 TIGRFAM pyrF: orotidine 5'-phosphate decarboxylase 248 467 IPR014732 GO:0004590|GO:0044205
Gma11g01721 912 TIGRFAM pyrE: orotate phosphoribosyltransferase 14 175 IPR004467 GO:0004588
Gma11g01721 912 MobiDBLite consensus disorder prediction 630 668 - -
Gma11g01721 912 SUPERFAMILY Ribulose-phoshate binding barrel 220 475 IPR011060 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01721 Gma-Chr11 18960658 18977610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01721 498 904 Eukaryotic Initiation Factors Gene Family AT3G07300 77.017 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01721 K13421 - gmx:100807008 887.1