Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01720 ATGGTGGAGATGTCTGTTCAACATGAAAATTCTGATGCCAATGGTGTATCAGGATCAGGATCTTGCCTTTATGATCTCTTATGTTCTGAAACACCAAGTTTGAATAGTCAAGTTCTTAGAGATCGATGGATGTCTTCCGGTCCACAAAAAAGGCTAGATAATTTGATGCGTCAAGCTGGGAACAAGTATTGTGCCGACTGTGGATCATCAGACCCAAAATGGGTgtcttcaaataatggagtatttatttgcatcaaatgctctggtgtacatagaagcctaggtgtccatatatcaaagGTTCTATCACTAAAGCTAGATGAATGGACAGATGAACAAGTTGATGCATTGGTGAATTTGGGTGGAAATACAGTAATTAATATGAAGTATGAAGCTTGCCTTCCAAGTAACATAAAAAAGCCAAAACCAAATTCTTCCATTGAGGAGCGCTATGATTTTATTAGGAGAAAATATGAGTTTCTACAGTTTTTGAATATTGAGGAGAATTTGTCTTGTCCCTTTGTACCATCTCATGCAAGAAGTTCCTCAAGCAACAAATTTCCACAAGACAAAAAACACTATGATAAACAAGCAACTAAAAGTCGTATTGGGAGCGCATTTCGAAATAGTTGGGGAAGAAAAGATTCTGAACATAAGAGTTCAAAGAAGAGCAACTCATTGGCAGGTATGGTTGAATTTATTGGGTTGATCAAGGTCAATGTGGTTAAAGGCACTAACCTTGCTATCCGTGATGTAATGAGTAGTGACCCTTATGTCATCATATCTCTTGGTCACCAATCAGTGAAGACACGTGTCATAAAGAGTAGTTTAAATCCAATTTGGAATGAAAGCTTAATGTTGTCAATTCCTGATCACATTCCACCTCTTAAAGTGCTTGTGTATGACAAAGATACTTTCTCAACGGATGATTTTATGGGCGAGGCTGAAATTGACATCCAACCTCTAGTTTCAGCTGCAAAGGCATATGAAAAATCTTCAATCAATGAGTCCATGCAGCTTGGAAAATGGGTAGCAAGTGGCGACAACACTCTTGTTAAAGATAGTATCATCTCCCTTGAAGAGGGGAAGGTCAAACAGGAGATCTCAGTGAGACTTCAACATGTTGAAAGAGGAGTGTTAGAGATTGAACTCGAATGTGTTCCTCTAACTCAATAG 1176 0.3614 MVEMSVQHENSDANGVSGSGSCLYDLLCSETPSLNSQVLRDRWMSSGPQKRLDNLMRQAGNKYCADCGSSDPKWVSSNNGVFICIKCSGVHRSLGVHISKVLSLKLDEWTDEQVDALVNLGGNTVINMKYEACLPSNIKKPKPNSSIEERYDFIRRKYEFLQFLNIEENLSCPFVPSHARSSSSNKFPQDKKHYDKQATKSRIGSAFRNSWGRKDSEHKSSKKSNSLAGMVEFIGLIKVNVVKGTNLAIRDVMSSDPYVIISLGHQSVKTRVIKSSLNPIWNESLMLSIPDHIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVSAAKAYEKSSINESMQLGKWVASGDNTLVKDSIISLEEGKVKQEISVRLQHVERGVLEIELECVPLTQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01720 391 MobiDBLite consensus disorder prediction 179 199 - -
Gma11g01720 391 CDD C2_ArfGAP 234 378 - -
Gma11g01720 391 SMART arf_gap_3 50 168 IPR001164 GO:0005096
Gma11g01720 391 SUPERFAMILY ArfGap/RecO-like zinc finger 49 164 IPR037278 -
Gma11g01720 391 CDD ArfGap 52 158 - -
Gma11g01720 391 Gene3D C2 domain 233 388 IPR035892 -
Gma11g01720 391 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 232 326 IPR035892 -
Gma11g01720 391 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 4 391 IPR044518 GO:0005096|GO:0005543
Gma11g01720 391 Gene3D Arf GTPase activating protein 35 171 IPR038508 -
Gma11g01720 391 PRINTS HIV Rev interacting protein signature 61 80 IPR001164 GO:0005096
Gma11g01720 391 PRINTS HIV Rev interacting protein signature 80 97 IPR001164 GO:0005096
Gma11g01720 391 PRINTS HIV Rev interacting protein signature 101 122 IPR001164 GO:0005096
Gma11g01720 391 Pfam C2 domain 236 326 IPR000008 -
Gma11g01720 391 ProSiteProfiles C2 domain profile. 214 333 IPR000008 -
Gma11g01720 391 ProSiteProfiles ARF GTPase-activating proteins domain profile. 49 171 IPR001164 GO:0005096
Gma11g01720 391 Pfam Putative GTPase activating protein for Arf 50 163 IPR001164 GO:0005096
Gma11g01720 391 SMART C2_3c 236 331 IPR000008 -
Gma11g01720 391 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 4 391 - -
Gma11g01720 391 MobiDBLite consensus disorder prediction 185 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01720 Gma-Chr11 18931607 18944037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01720 49 391 C2H2 Transcription Factor Family AT4G21160 49.854 1.40e-120 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01720 K12486 - gmx:100799376 784.637