Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01717 ATGGCGGAAGAACACCGATGTGAAACTCCCGAAGGTCACGAACTCTGCGTCAACAACTGCGGCTTCTTGGGTAGCACCGCCACGATGCACCTTTGCTCCAAATGCTACAGTTCAATCCGTTTGAAGGAGCAAGAAGAAGTGTCAACGAAATTCACAATCGAAATTGCGCTATCTTCTTCCTCCTCGACGAAACCGTCGTCGTCCACGTCACCTCTGCCGTCAGTGTCGATGTGCTCATCGAATCTGAATCTGCACCGCCGTTTGCAGCGGAGGTTGAGGTTGCGATCACGATCGCAGTGGTGTCGAGTTCTATTTCCATAA 321 0.514 MAEEHRCETPEGHELCVNNCGFLGSTATMHLCSKCYSSIRLKEQEEVSTKFTIEIALSSSSSTKPSSSTSPLPSVSMCSSNLNLHRRLQRRLRLRSRSQWCRVLFP 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01717 106 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 6 1 77 - -
Gma11g01717 106 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Gma11g01717 106 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 77 - -
Gma11g01717 106 Pfam A20-like zinc finger 15 36 IPR002653 GO:0003677|GO:0008270
Gma11g01717 106 Gene3D - 1 73 - -
Gma11g01717 106 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Gma11g01717 106 MobiDBLite consensus disorder prediction 58 78 - -
Gma11g01717 106 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01717 Gma-Chr11 18887372 18887692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01717 1 41 C2H2 Transcription Factor Family AT3G52800 73.171 8.55e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01717 - - gmx:106795030 169.088