Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01709 ATGGAAATGGAGCACAGAGTGATTCCGTTTTCCACGAGAGGGTGGAGGAggacttatgatgttttcctcagttttagaggagaggatacccgttttggtttcactggtcatctctacaacactttacgtcatagagggatcaacactttcatggatgatgaggcgcttgagagaggagaacaaatatcagaagccattttcaaagcaattgaagagtctgggaaagccatcgttgtgttctcgaaaaactatgcatcctcaacatggtgccttgaagaacttgtcaaaatcctcagttgtatgaaaactaaggaacttaaagtttatccactattttacaacgtggatccatctgaggtacggtaccagagagcaagttatggtcagcaattggctaagcatgaaatcaaaatgaagtatagcaaacagaaggtgcaaaactggaggctggctctgcatgaagctgccaatctTGTAGGGTGGCATTTTAAAGATGGACATGGATATGAATATGAATTTATCACACGGATTGTTGACGTGGTGGGCATATCAAAACCCAATCTTTTGCCTGTTGATGAATatctagttggaattgagtcacgtatacctaaaataatattccgtttgcaaatgactgatcccactgtcatcatggtggggatatgtggagttagtggaattggtaaaaccactcttgctcaagctttgtataatcacatcagcccacaatttgaaggttcatgctttctcaatgatgttagaggaagttcagccaaatatgggttagcatatctgcaagagggaattctttctgatatagctggtgagaatatcaaagtggataatgagcacaaaggaattccaatcctgattaggaagttgcacggcaaaagggttcttttgatacttgataatgtggacaagctggagcaattggagtatttagcaggagaatgcaattggtttggtttgggcagtagaattatcataactagcaggtgtaaagatgttctagctgctcatggagttgaaaatataTATGATGTACCTACGTTAGGATATTATGAAGCTGTGCAACTTTTAAGTTCCAAGGTAACCACGGGACCTGTACCTGATTATTATAATGCCATTTGGGAACGTGCAGTTCACTGTTCCCATGGCCTTCCATTGGTTTTGAAGGATATTGGTTCTGATTTGTCAGAAAAAATGAATGTTATTGGTTCTGATTTATCATGGCCTTCAATTGATGAATTGGGGATTGCACTAGAAAGATATGAACGAGTTTGTgatggagaaattcagagtatacttaaagtgagttatgatagtttgaatgaatgtgagaagaaaattttccttgacattgcatgtttcttcattggagagccagtatcatatgttgaggaaatactatcagctattggtttcaatccacaacatagtatcaacagacttatcgatagatctctcctatctatcgattccagtggaaggttgatgatgcatgaccatataaaagacatggccatgaaaatagtgcaacaggaagcacccctgcatccagaaaaacgaagtagattatggtgccctcaagatgttcttcaagttttaaatgaaaatgagGGATCTGATAAAATTGAAGTTATGATGTTGGTTGACTTACCACGAGGAAATGATGTACTGAAGTTGAGTGACAAAGCCTTCAAAAATATGAAAAGCCTGAGAATGTTAATTATTAAGGATGCCATATATTCTGGAATCCCCCAACATCTCTCAAATAGCTTGAGAGTTCTGATATGGAGTGGATATCCTTCAGGATGCTTACCACCTGATTTTGTCAAAGTGCCTTCTGATTGTCTCATTTTGAACAATTTCAAGAATATGGAGTGTTTGACTAAAATGGATTTCACTGATTGTGAATTTTTGTCAGAAGTACCTGACATTTCTGGAATCCCAGACTTAAGGATATTGTATCTAGATAATTGTATAAATTTGATTAAGATTCACGATTCTGTTGGATTTCTTGGTAATCTTGAAGAGCTAACTACGATAGGATGCACTAGTCTAAAAATAATTCCATCAGCATTCAAGTTGGCATCTCTTAGAGAGCTCTCTTTCTCTGAGTGCTTGAGACTTGTGAGGTTTCCAGAAATATTGTGTGAGATAGAAAATTTGAAGTATCTCAACTTGTGGCAAACTGCCATAGAGGAATTACCATTCTCTATTGGAAATCTTAGAGGGCTTGAATCTTTAAATCTAATGGAATGTGCTAGGCTTGATAAGCTACCCAGTAGCATTTTTGCACTACCAAGACTTCAGGAAATTCAAGCTGACTCGTGTAGAGGGTTTGACATTTCTATTGAATGTGAAGATCATGGACAACCGAGATTATCTGCTTCTCCAAACATTGTTCATCTGTATCTGAGCTCTTGCAACTTAACAACTGAACATCTTGTTATATGTCTCAGTGGTTTTGCCAATGTGGTATATTTGGACATATCTTACAATAGTTTTACGGTCCTTCCAGCATGCATTAAAGAATGTATCAATTTGAAGACTCTTCTGCTAAGCAATTGCAACCAACTTCAAGATATTTTAGTCATTCCCTCTAAATTAGAAGACATAGATGCATTAAACTGCACATCTTTGACATCTCAATCATCAAGTGTACTATTGAGCCAGGCATTTCATGGAACTGGGCAGAAAACTGTAATTCTTCCAGGTTTAAGGATTCCAGAATGGTTTGATCATTGCAGCAGTGAAAGATCCATAACCTTTTGGGGCCGTGAGAGATTCCCAAGGATTTGTGTGTGTGTTTCTTTTGGAATGCTCGAAAATTCACTGCACCACCATTTTCAAGTTACATTCTGTATAGTCATCAATGGCCACAAAAGGATATTGTCCAACCGTTGTTACGATTGGTCAGTTCAGACAGATCATGTGTGGCTTTTTGATCTAACTGCCCTTGTTAGTTATGAAGATCTCAGAGGAACATTGGTGAAGAGTGACTGGAATCATGTGGAGATTGAAATGGAATGGAATTGCTGTATACAAGGTGACCATGGGCCAACAAGAATGGCTATTGTGAAATGGTATGGAATTCACGTATACAGGCAGGAAAGTAAAATGGAGGATATTTCTTTCACAAATCCCAAAAATCTACAAGAAAATATTACAAGTAAAAGGGTTGGTACTGAGGTTTTGGATTCATCAGAGAAAAGCCAAAAGAAGTTGAAAGCAATTTCTCAGTGGGATTGA 3258 0.237 MEMEHRVIPFSTRGWRRTYDVFLSFRGEDTRFGFTGHLYNTLRHRGINTFMDDEALERGEQISEAIFKAIEESGKAIVVFSKNYASSTWCLEELVKILSCMKTKELKVYPLFYNVDPSEVRYQRASYGQQLAKHEIKMKYSKQKVQNWRLALHEAANLVGWHFKDGHGYEYEFITRIVDVVGISKPNLLPVDEYLVGIESRIPKIIFRLQMTDPTVIMVGICGVSGIGKTTLAQALYNHISPQFEGSCFLNDVRGSSAKYGLAYLQEGILSDIAGENIKVDNEHKGIPILIRKLHGKRVLLILDNVDKLEQLEYLAGECNWFGLGSRIIITSRCKDVLAAHGVENIYDVPTLGYYEAVQLLSSKVTTGPVPDYYNAIWERAVHCSHGLPLVLKDIGSDLSEKMNVIGSDLSWPSIDELGIALERYERVCDGEIQSILKVSYDSLNECEKKIFLDIACFFIGEPVSYVEEILSAIGFNPQHSINRLIDRSLLSIDSSGRLMMHDHIKDMAMKIVQQEAPLHPEKRSRLWCPQDVLQVLNENEGSDKIEVMMLVDLPRGNDVLKLSDKAFKNMKSLRMLIIKDAIYSGIPQHLSNSLRVLIWSGYPSGCLPPDFVKVPSDCLILNNFKNMECLTKMDFTDCEFLSEVPDISGIPDLRILYLDNCINLIKIHDSVGFLGNLEELTTIGCTSLKIIPSAFKLASLRELSFSECLRLVRFPEILCEIENLKYLNLWQTAIEELPFSIGNLRGLESLNLMECARLDKLPSSIFALPRLQEIQADSCRGFDISIECEDHGQPRLSASPNIVHLYLSSCNLTTEHLVICLSGFANVVYLDISYNSFTVLPACIKECINLKTLLLSNCNQLQDILVIPSKLEDIDALNCTSLTSQSSSVLLSQAFHGTGQKTVILPGLRIPEWFDHCSSERSITFWGRERFPRICVCVSFGMLENSLHHHFQVTFCIVINGHKRILSNRCYDWSVQTDHVWLFDLTALVSYEDLRGTLVKSDWNHVEIEMEWNCCIQGDHGPTRMAIVKWYGIHVYRQESKMEDISFTNPKNLQENITSKRVGTEVLDSSEKSQKKLKAISQWD 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01709 1085 SUPERFAMILY L domain-like 501 885 - -
Gma11g01709 1085 SMART till_3 18 158 IPR000157 GO:0007165
Gma11g01709 1085 ProSiteProfiles TIR domain profile. 17 152 IPR000157 GO:0007165
Gma11g01709 1085 Gene3D Ribonuclease Inhibitor 545 713 IPR032675 -
Gma11g01709 1085 PRINTS Disease resistance protein signature 218 233 - -
Gma11g01709 1085 PRINTS Disease resistance protein signature 293 307 - -
Gma11g01709 1085 PRINTS Disease resistance protein signature 385 399 - -
Gma11g01709 1085 PRINTS Disease resistance protein signature 743 759 - -
Gma11g01709 1085 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 161 IPR035897 -
Gma11g01709 1085 Gene3D - 15 184 IPR035897 -
Gma11g01709 1085 Pfam TIR domain 19 184 IPR000157 GO:0007165
Gma11g01709 1085 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1066 IPR044974 GO:0006952
Gma11g01709 1085 Gene3D - 185 345 IPR027417 -
Gma11g01709 1085 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 1066 - -
Gma11g01709 1085 SMART AAA_5 215 353 IPR003593 -
Gma11g01709 1085 Gene3D Ribonuclease Inhibitor 714 937 IPR032675 -
Gma11g01709 1085 Pfam NB-ARC domain 200 405 IPR002182 GO:0043531
Gma11g01709 1085 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 455 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01709 Gma-Chr11 18784179 18789002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01709 9 780 WRKY Transcription Factor Family AT4G12020 28.801 1.23e-64 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01709 - - gmx:100796191 2175.21