Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01695 ATGTCTACTACCGGTAATGTTCTGGCTTCCACTCCAACGCCAAGGCTATTAGGCAAAGTGGCATTGGTCACAGGTGGAGCATCTGGAATTGGAGAAAGCATTGTGCGTCTCTTCCATATCCATGGTGCTAAAATTTGTATAGCTGATGTGCAAGACAATCTTGGAAAGCAGATCTGTGAATCCCTTGGCGACGAAGCAAATGTTGTTTTTGTCCATTGTGATGTTACAGTAGAGGATGATGTTTCCCATGCAGTGAACTTCACTGTGGGTAAATTTGGCACCCTTGACATCATAGTCAACAATGCTGGAATCTCCGGATCGCCTTGTCCTGATATCCGCGATGCAGACTTATCAGAATTCGATAAGGTGTTTAGTATAAACGCAAAGGGAGTGTTTCATGGGATGAAGCACAGCGCTCGAGTTATGATCCCAAACAAGAAGGGCTCAATCATTTCTTTAAGCAGTGTAGCAAGTGCCTTAGGTGGCATAGGAATACATGCATACACAGGATCCAAACATGCTGTTTTAGGGCTCACAAAGAGTGTTGCAGCTGAATTGGGGAAGCACAGTATAAGAGTGAATTGTGTGTCACCTTATGCTGTTGCAACAGGTTTGGCTTTAGCCCATTTGCCTGAGGATCAGAGAACTGAGGATGCTTTGGCCGGTTTTCGCGATTTTACCGGGAGAATGGCCAACTTGCAGGGGGTAGAGTTAACTACTCATGATATAGCTAATGCTGTGCTCTTCCTTGCTAGTGATGAAGCAAGATATATAAGTGGAGAGAATCTCATGGTTGATGGTGGCTTCACGAGTGTAAATCACTCACTCCAAGTTTTTAAATGA 843 0.4437 MSTTGNVLASTPTPRLLGKVALVTGGASGIGESIVRLFHIHGAKICIADVQDNLGKQICESLGDEANVVFVHCDVTVEDDVSHAVNFTVGKFGTLDIIVNNAGISGSPCPDIRDADLSEFDKVFSINAKGVFHGMKHSARVMIPNKKGSIISLSSVASALGGIGIHAYTGSKHAVLGLTKSVAAELGKHSIRVNCVSPYAVATGLALAHLPEDQRTEDALAGFRDFTGRMANLQGVELTTHDIANAVLFLASDEARYISGENLMVDGGFTSVNHSLQVFK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01695 280 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 IPR002347 -
Gma11g01695 280 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Gma11g01695 280 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Gma11g01695 280 Pfam Enoyl-(Acyl carrier protein) reductase 25 270 - -
Gma11g01695 280 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Gma11g01695 280 PRINTS Glucose/ribitol dehydrogenase family signature 93 104 IPR002347 -
Gma11g01695 280 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Gma11g01695 280 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Gma11g01695 280 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Gma11g01695 280 PRINTS Glucose/ribitol dehydrogenase family signature 233 253 IPR002347 -
Gma11g01695 280 Gene3D - 7 279 - -
Gma11g01695 280 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 14 280 - -
Gma11g01695 280 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 271 IPR036291 -
Gma11g01695 280 CDD secoisolariciresinol-DH_like_SDR_c 15 270 IPR045309 GO:0016616
Gma11g01695 280 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 155 183 IPR020904 GO:0016491
Gma11g01695 280 PANTHER XANTHOXIN DEHYDROGENASE 14 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01695 Gma-Chr11 18499866 18503244 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01695 2 269 Acyl Lipid Metabolism Gene Families AT1G24360 31.183 3.74e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01695 K09841 - gmx:100801691 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02599 15 54124156 54138161 Gma11g01695 11 18499866 18503244 GST