Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01676 ATGGTGATTAATGAGCAAAAATCAAATGTTAATGGTTCTTTGACAGAAAGAGTTGACAAAGTATTGGACTTTTATGGTGCATTGTTTAGTTTCTTGGAATCAACTGTTTCAAATACACAACAATTAGAGAGAATCTTAATGGAGAGGACTCTACTAAGGGAAGAAATAAAGAACATTGTTTCATTTGAAGGAGCTGAGAGAAAGGAGAGGCATGAGAAATTTTACACTTGGGTTCCAAGGCTAGAAATGGATGGGTTTGAGAAGGGACATATTAGCCATCATGGGATAAGGCAAGCAACAAAACATGGTTTAGAAATGGTTGGTTATGGAAATGGATATAAGCTTGTTTGTCTGGAGAATAATTGTTTGTTTGTCTGTTGGAATGATAAGCCACTTTTTTCTGTATCAACCTGGACACTTTAG 423 0.357 MVINEQKSNVNGSLTERVDKVLDFYGALFSFLESTVSNTQQLERILMERTLLREEIKNIVSFEGAERKERHEKFYTWVPRLEMDGFEKGHISHHGIRQATKHGLEMVGYGNGYKLVCLENNCLFVCWNDKPLFSVSTWTL 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01676 140 ProSiteProfiles GRAS family profile. 1 139 IPR005202 -
Gma11g01676 140 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 139 IPR005202 -
Gma11g01676 140 Pfam GRAS domain family 1 139 IPR005202 -
Gma11g01676 140 PANTHER SCARECROW-LIKE PROTEIN 3 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01676 Gma-Chr11 18267393 18267815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01676 1 138 GRAS Transcription Factor Family AT1G50420 45.324 2.22e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g01676 GRAS 6.5e-31 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01676 - - csin:114307341 138.658