Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01675 ATGAATGGGGAGGATAGGGGTAAATACCTGACCCATACTCTGAACACATGTGCCAAGTTTATTGAATCAGGCAGCTTCATGAGTGCAGATATTGGATTGGACTATATTGCTCACATTGCATCCCTTTATGGTGATGCGATGCAAAGGGTAGCCACCTATATTAGTATTGGTCTAGCTTTCCAAGTCCTAAAAAATTTGCATGGAGTACCTAAATCAATCAATTTGCCAACAACAATGTCAACCTCAGAAGAACAACTTGTTAAGAGAACTATGGAGAGGCTTGATCTTGAAGAAATGTCTGTGGTGAAAGGAGAGCCTCTTGCAATCAGCTCAGTACTTCAGCTGCTCACTCTTTTGGCCACTGATGATGCAATGGTCTACATCAAGAGCTCGCCAGGTGGAATCATTGTAGAAAAGGACGTttgtggtaagaatcctgaaactgctcaaatataa 456 0.3925 MNGEDRGKYLTHTLNTCAKFIESGSFMSADIGLDYIAHIASLYGDAMQRVATYISIGLAFQVLKNLHGVPKSINLPTTMSTSEEQLVKRTMERLDLEEMSVVKGEPLAISSVLQLLTLLATDDAMVYIKSSPGGIIVEKDVCGKNPETAQI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01675 151 Pfam GRAS domain family 10 83 IPR005202 -
Gma11g01675 151 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 90 IPR005202 -
Gma11g01675 151 PANTHER SCARECROW-LIKE PROTEIN 3 3 90 IPR030008 GO:0003700|GO:0005634|GO:0009739
Gma11g01675 151 ProSiteProfiles GRAS family profile. 1 151 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01675 Gma-Chr11 18254164 18254910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01675 4 89 GRAS Transcription Factor Family AT1G50420 43.182 2.59e-16 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g01675 GRAS 3.9e-09 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01675 - - gmx:100801980 92.4337