Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01674 ATGATCCTTCTTCTTGACTGTGCTAAATGTGTTGCATCTGGAAGCATCAAGAATGCAGATATTGGCCTTGAGTACATATCTCAGATTTCATCACCTGATGGTAGTGCAGTGCAAAGGATGGTCACTTATTTCAGCGAAGCACTTAGTTACAGGATAATAAAACGTTTGCCAGGTGTATATAAGTCTCTCAATCCACCAAAAACATCACTGTCTTCAGAAGACATCCTTGTTCAGAAATACTTCTATGATCTGTGTCCTTTTTTAAAGTTCTCATACCTGATCACAAACCAAGCCATTGTGGAGGCGATGGAATTCGAAAAGGTGGTTCACATTATTGATCTCCACTGTTGTGAGCCAGCTCAATGGATAGATCTTCTACTAACTTTCAAAAACCGTCAGGGAGGTCCACCTCATCTCAAAATTACAGGCATTCATGAGAAGAAAGAGGTTTTAGACCAAATGAACTTTCATTTGACAACTGAAGCAGGGAAATTGGATTTTCCTTTGCAGTTCTATCCAGTTATTAGCAAACTGGAAGATGTTGACTTTGAGAAGTTGCCTGTGAAGATAGGAGATGCTCTTGCAATCAGTTCTGTTCTTCAGCTTCATTCTCTTCTTGCCACTGATGATGACATGGCGGGGAGGATCTCACCGGCTGCGGCCGCGACTATGAATCTGCAGAGAGCAGTGCATATGGGCCAAAGGACTTTTGCAGAGTGGCTTGAGAGAGATATGATCAATGCATATATCTTGAGTCCTGATTCTGCATTGTCACCTCTTTCCTTAGGTGCCTCACCTAAGATGGGGATCTTTCTCAACGCTATGCAAAAACTCCAACCAAAACTGGTGGTGATTACTGAACAAGAATCAAACCTGAATGGATCCAATTTGATGGAGAGAGTTGATAGAGCACTGTACTTTTACAGTGCATTGTTTGACTGCTTGGAATCTACTGTTTTGAGAACATCAGTAGAGAGACAAAAACTTGAGAGCATGCTTCTGGGTGAGCAGATTAAGAACATCATTGCTTGTGAGGGTGTTGATAGAAAGGAGAGACACGAGAAACTCGAGAAATGGATTCGAAGGCTTGAAATGGCTGGTTTTGTGAAGGTACCTTTGAGCTACAATGGGAGGATAGAAGCCAAGAATCTGCTGCAGAGATATAGTAATAAATACAAATTTCGAGAAGAGAATGATTGTTTACTTGTCTGCTGGAGTGATACACCAATGTTTTCTGTATCAGCTTGGAGTTTTAGTAGATGA 1263 0.4133 MILLLDCAKCVASGSIKNADIGLEYISQISSPDGSAVQRMVTYFSEALSYRIIKRLPGVYKSLNPPKTSLSSEDILVQKYFYDLCPFLKFSYLITNQAIVEAMEFEKVVHIIDLHCCEPAQWIDLLLTFKNRQGGPPHLKITGIHEKKEVLDQMNFHLTTEAGKLDFPLQFYPVISKLEDVDFEKLPVKIGDALAISSVLQLHSLLATDDDMAGRISPAAAATMNLQRAVHMGQRTFAEWLERDMINAYILSPDSALSPLSLGASPKMGIFLNAMQKLQPKLVVITEQESNLNGSNLMERVDRALYFYSALFDCLESTVLRTSVERQKLESMLLGEQIKNIIACEGVDRKERHEKLEKWIRRLEMAGFVKVPLSYNGRIEAKNLLQRYSNKYKFREENDCLLVCWSDTPMFSVSAWSFSR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01674 420 Pfam GRAS domain family 3 416 IPR005202 -
Gma11g01674 420 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 418 IPR005202 -
Gma11g01674 420 ProSiteProfiles GRAS family profile. 1 417 IPR005202 -
Gma11g01674 420 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 3 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01674 Gma-Chr11 18244903 18246165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01674 3 416 GRAS Transcription Factor Family AT1G50420 52.246 1.38e-148 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g01674 GRAS 1.9e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01674 - - gmx:100779726 826.624