Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01666 ATGGTTAAGAAGGGTTGGTTTAGCATGTTTAAGAAGCTCTTTTTATGGAACACACATTCCTCACAAGAGAAGAAGGAGAAAAGAAGAAGGGCTTGGATATTTGGGAGGGTTAAGACCAAGAGATTGCCTTCAATTACAGCTCCACCACCACCACCTTCAAAAGAAACAAGACTAAGTGAGGCTGAGGAAGAACACAGCAAGCATGCTttgacagtggccattgcttcagctgctgctgctgaagctgctattactgcagctcaggttgctgttgaggttgttaggctccaatctgctgctCATCTACAACTTAAAGAAAAACAAGAACAACTTCAATTACAACCTGTTAAAACTAGCCATGATGCTCCTCAGAATACACACCAACGCCAGAGGAAGATTCAAGAATCTTCAGCCATCAAAATTCAAACAGCATATAGAGGTTACCTAGCAAGGAAAGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGAAGAGCTGTGAGACGCCAAGCTTTGAGTACTCTAAAGTGCTTAGAGTCAATAGTAAGTATCCAATCACAGGTCTTCGCAAGGAAATCCCAAATGGTTGAAGAAAGATGGGATTGTGGTGAACATGAAGAGATGCAAGGTTCAAGAGACAAGATAATAAGGATGGACTCAAACAGTGAGAGAACGTGGGATGACAGCATTTTGTTGAAGGAAGAGGTAGATGCCTCTTGCGTAAGCAAGAAAGAAGCAGTTCTTAAGAGAGAAAAAGTAAAAGAATACTCATTTAACCACAGAAGGTCAGCTGAATCAGAAAGAAATAAAATAAATGGAAGATGGAGGTACTGGATGGAGCAGTGGGTAGACACACAACTTTCTAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATTATTCTAGACCTGGGGAGGAATGTGGAAGGAGACAACTAAAGCTTAGAAATTTTCAGAGACAAAACCAGATTGAAGCATTAGATTCTCCATCACTTTCTTCAAGGAACCAAACTTCAGGGGCAGAAGATCACTCAGTTCCAAGCTCTCCTGCAATTCCTACATACATGGCTGCAACAAAATCAACACAAGCAAAAGCAAGATCAACAAGCTCCCCAAGAGCAAGGATAGGAGGGAATTTTGACATCAACTCTGATAGCTATTCACCATGCAAGAATAAGTTACCTATTGTGACTTCTATTAATGGTGAAGTGCTTAGTAATGGTAGGATTGGCAAGCTCAGCAGTAATCAGCAAAGATCACCTAGCTTAAAGGGCCTTCCAAGACCTCTAAAATTAAGTCAAACATTGAGGGGTCTTAGCATTAATTCAGATTGCCCAGTGCCAATTTGA 1374 0.377 MVKKGWFSMFKKLFLWNTHSSQEKKEKRRRAWIFGRVKTKRLPSITAPPPPPSKETRLSEAEEEHSKHALTVAIASAAAAEAAITAAQVAVEVVRLQSAAHLQLKEKQEQLQLQPVKTSHDAPQNTHQRQRKIQESSAIKIQTAYRGYLARKALRALKGIVKLQAIIRGRAVRRQALSTLKCLESIVSIQSQVFARKSQMVEERWDCGEHEEMQGSRDKIIRMDSNSERTWDDSILLKEEVDASCVSKKEAVLKREKVKEYSFNHRRSAESERNKINGRWRYWMEQWVDTQLSKSKELEDLDSVFSSHYSRPGEECGRRQLKLRNFQRQNQIEALDSPSLSSRNQTSGAEDHSVPSSPAIPTYMAATKSTQAKARSTSSPRARIGGNFDINSDSYSPCKNKLPIVTSINGEVLSNGRIGKLSSNQQRSPSLKGLPRPLKLSQTLRGLSINSDCPVPI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01666 457 ProSiteProfiles IQ motif profile. 158 185 IPR000048 GO:0005515
Gma11g01666 457 PANTHER IQ-DOMAIN 5-RELATED 1 451 - -
Gma11g01666 457 MobiDBLite consensus disorder prediction 113 135 - -
Gma11g01666 457 MobiDBLite consensus disorder prediction 333 353 - -
Gma11g01666 457 MobiDBLite consensus disorder prediction 366 385 - -
Gma11g01666 457 PANTHER IQ-DOMAIN 11 1 451 - -
Gma11g01666 457 SMART iq_5 133 155 IPR000048 GO:0005515
Gma11g01666 457 ProSiteProfiles IQ motif profile. 134 162 IPR000048 GO:0005515
Gma11g01666 457 MobiDBLite consensus disorder prediction 41 64 - -
Gma11g01666 457 MobiDBLite consensus disorder prediction 333 360 - -
Gma11g01666 457 Pfam Protein of unknown function (DUF4005) 338 430 IPR025064 -
Gma11g01666 457 Pfam IQ calmodulin-binding motif 136 155 IPR000048 GO:0005515
Gma11g01666 457 Gene3D - 134 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01666 Gma-Chr11 18105942 18108348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01666 3 456 IQD Protein Family AT5G13460 43.432 8.54e-99 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01666 - - gmx:100777067 854.744