Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01652 ATGCTCAATAAGACTCTCTCTTTTGCCATGGGGTGCTGTAGTTGCTTCGGGTTCATCAGGACACCTAACCGTCAAAGTCAAAGGTCTAAGCCTGCCACTAACAATAATAATCTCTGCCAGGAGCCTCTTCTAGATGATGACATTGAAGATGAAGAGGGTGAGCATTTGTACAATGATGAGGTTACTAACACTAGTGGAGATGAAGGCGAGGAGGAAACTCGTCCCAAGCGATCGGAAGAAATTTTGAACTTGAGAGTAGAAAATGACATGATTTGTACACGGTTTCCTGTTAAGGAGACTCACAAACTTGTGCGCACCGAGGATGAAAATGGGAACAAGATGATAAATGAGTATATTCGTGAGTGTAAAATTGGTTCTGGTAGCTATGGGAAAGTGGCTCTTTATCAAAGCTCTGTCGATGGAAAGAATTATGCAATTAAGGCCTTTCATAAATCTCATTTACTGAAGCTTCGAGTTTCACCCTCAGAAACTGCCATGACTGACGTACTACGCGAGGTTCTCATTATGAAAATGCTGGAACATCCTAATATAGTCGATCTCATTGAGGTGATTGATGACCCACAGTCAGATAACTTCTACATGGTACTTGAATATGTGGAAGGAAAATGGATATGCGAGGGTTCAGGTACCACTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATACTTGCGTGATATAGTTTCTGGATTAACATATCTCCATGCTCATAATATTGTTCATCTGGATATTAAGCCAGATAATCTGTTGATTACTCGTCATGGTACAGTAAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGATAAAGATGAGCTTCGTCGATCACCTGGCACTCCTGTTTTCACTGCACCAGAGTGTATTTTAGGTGGTGTGAAATATGGTGGTAAAGCTGCAGACACGTGGGCAGTAGGAGTTACTTTATACTGTATGATATTGGGTGAATACCCTTTTCTTGGAGACACACTTCAAGATACATATGACAAAGTAAGAAATACACACTCAGACATATATGACAAAATAGTCAATAATCCTTTAGTACTCCCCAACGATATGAATCCCCCATTGAAGAACTTAATAGAAGGCCTACTTTCCAAAGACCCAAGATTAAGGATGTCTTTAAGTGATGTTGCGGAAGATAGCTGGGTTATTGGAGATGATGGGCCAATTCCTGATTACCTTTGTTGGTGCAAAATGAAGAGCTTGGGAATTGAGGACAATGATGAGAGCAATACTGACTAA 1266 0.4107 MLNKTLSFAMGCCSCFGFIRTPNRQSQRSKPATNNNNLCQEPLLDDDIEDEEGEHLYNDEVTNTSGDEGEEETRPKRSEEILNLRVENDMICTRFPVKETHKLVRTEDENGNKMINEYIRECKIGSGSYGKVALYQSSVDGKNYAIKAFHKSHLLKLRVSPSETAMTDVLREVLIMKMLEHPNIVDLIEVIDDPQSDNFYMVLEYVEGKWICEGSGTTCGLGEETARRYLRDIVSGLTYLHAHNIVHLDIKPDNLLITRHGTVKIGDFSVSQAFEDDKDELRRSPGTPVFTAPECILGGVKYGGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKVRNTHSDIYDKIVNNPLVLPNDMNPPLKNLIEGLLSKDPRLRMSLSDVAEDSWVIGDDGPIPDYLCWCKMKSLGIEDNDESNTD 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01652 421 Gene3D Transferase(Phosphotransferase) domain 1 217 397 - -
Gma11g01652 421 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Gma11g01652 421 MobiDBLite consensus disorder prediction 57 77 - -
Gma11g01652 421 Gene3D Phosphorylase Kinase; domain 1 112 215 - -
Gma11g01652 421 SUPERFAMILY Protein kinase-like (PK-like) 112 401 IPR011009 -
Gma11g01652 421 CDD STKc_LKB1_CaMKK 124 391 - -
Gma11g01652 421 Pfam Protein kinase domain 120 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01652 421 ProSiteProfiles Protein kinase domain profile. 118 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01652 421 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 421 - -
Gma11g01652 421 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 421 - -
Gma11g01652 421 SMART serkin_6 118 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g01652 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01652 Gma-Chr11 17871702 17876740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01652 124 398 CBL-interacting serine-threonine protein kinases AT5G35410 32.364 2.69e-41 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Gma11g01652 Pkinase 2.9e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01652 K00908 - gmx:100816625 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01652 11 17871702 17876740 Gma11g01652 11 17871702 17876740 ECH
Gma12g00607 12 5106611 5112535 Gma11g01652 11 17871702 17876740 GST