Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01610 ATGGTGTTTGAATTGTATGATAAGGTGCTAGGAGCATGTTCCTTGACAAAAGACCTTGAGGTTCTAGCATTTGGTGATCAAACCACTATCAGAGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAATAGTGCAAATAGCCCGTGCCCTATACCATGGTTGTGATATATATCTGTTTGATGATCCCTTCAGTGCATTGGATGCTCATACAAGATCCCATCTCTTTAAGCCTTCCCACGCAAAAGCACCCTTTGGTTTTGCTCATCAAGATGAACATTCAGAACTCCCCTTCTGGCTGATGCTTGCACACATGTAA 318 0.4277 MVFELYDKVLGACSLTKDLEVLAFGDQTTIREKGINLSGGQKQIVQIARALYHGCDIYLFDDPFSALDAHTRSHLFKPSHAKAPFGFAHQDEHSELPFWLMLAHM 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01610 105 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 4 77 - -
Gma11g01610 105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 77 IPR027417 -
Gma11g01610 105 Pfam ABC transporter 26 64 IPR003439 GO:0005524
Gma11g01610 105 Gene3D - 3 84 IPR027417 -
Gma11g01610 105 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 4 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01610 Gma-Chr11 17361277 17362165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01610 17 71 Calmodulin-binding Proteins AT2G36910 47.273 1.78e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01610 - K05666 zju:107433535 123.635