Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01605 ATGGCTGATATTGAGGGTTCTCCAGGAAGCTCCATGCATGGAGTAACTGGAAGGGAACAAACCTTCATAGCCTCAGTGGCTTCCCCTATGGTCCCTACAGACACCACAGCAAATTTCGCTTTGCCAGTAGATTCTGAGCACAAGGCAAAAATTTTCAAGCTTTTTTCCTTAGCCAACCCTCACATGAGAACCTTCCACTTGTCTTGGATATCCTTCTTCACTTGCTTTGTCTCGACCTTCGCGGCGGCGCCACTTGTCCCCATCATTCGCGACAACCTTAACCTCACCAAAGGCGACATCGGGAACGCCGGCGTTGCCTCTGTCTCCGGCAGCATCTTCTCCAGGCTCACAATGGGCGCGGTTTGTGACCTACTTGGACCGCGTTACGGCTGTGCCTTCCTCATCATGCTCTCTGCACCAACCGTGTTCTGCATGTCTTTTGTGAATGATGCTGCTGGTTACATAGCAGTGAGGTTCATGATAGGGTTTTCGTTGGCCACTTTTGTTTCATGCCAGTATTGGATGAGTACTATGTTTAATAGTAAGATTATAGGGCTTGTGAATGGGACTGCTGCAGGGTGGGGGAACATGGGTGGTGGGGCCACTCAGCTCATAATGCCTATGGTTTATGAGTTGATTAGAAGAGCTGGGGCTACTCCCTTTACGGCTTGGAGGATTGCTTTCTTCGTCCCTGGTTGGATGCATGTGGTCATGGGGATCTTGGTCCTAACCCTAGGCCAAGATTTACCTGATGGAAACCTTGGTGCCTTGCAGAAGAAGGGTAATGTTGCCAAAGACAAATTCTCCAAGGTGCTATGGTATGCCATAACAAATTACAGGACATGGGTTTTTGCCCTCCTATATGGGTACTCGATGGGAGTTGAATTAACCACTGACAATGTCATTGCTGAGTATTTCTATGACAGGTTTAATCTCAAGCTACACACTGCTGGAATCATTGCTGCTTCATTTGGAATGGCAAATCTCCTAGCTCGTCCCTTTGGTGGATACACTTCTGATGTTGCAGCCAGGTTGTTTGGCATGAGGGGCAGGCTTTGGAACCTGTGGATCCTCCAAACCCTAGGAGGCGTTTTCTGCATATGGCTTGGGCGTGCCAATTCCCTTCCCATTGCAGTCTTGGCCATGATCCTCTTCTCCATTGGTGCTCAAGCTGCATGCGGTGCAACTTTTGGCATCATTCCCTTCATCTCAAGGCGTTCTCTTGGGATCATATCAGGCCTAACTGGTGCAGGTGGAAACTTTGGTTCTGGTTTGACCCAATTGATCTTCTTTTCAACCTCAAGGTTTTCTACTTCCACTGGTCTCTCCCTTATGGGTGTCATGATTGTGTGTTGCACTCTTCCTGTGACTCTTGTTCACTTCCCTCAGTGGGGTAGCATGTTCCTCCCTCCTTCAAAGGATGTCAACAAGTCCACTGAGGAATACTATTACACCGCTGAGTGGAACGAGGAAGAGAAGCAAAAAGGGTTGCACCAGAATAGTCTCAAGTTTGCTGAGAATAGCCGTTCAGAGAGAGGTAAGCGTGTGGCCTCAGCACCAACACCACCAAACACAACTCCAACTCATGCCTAG 1593 0.4871 MADIEGSPGSSMHGVTGREQTFIASVASPMVPTDTTANFALPVDSEHKAKIFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKGDIGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVNDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPMVYELIRRAGATPFTAWRIAFFVPGWMHVVMGILVLTLGQDLPDGNLGALQKKGNVAKDKFSKVLWYAITNYRTWVFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAASFGMANLLARPFGGYTSDVAARLFGMRGRLWNLWILQTLGGVFCIWLGRANSLPIAVLAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSTSRFSTSTGLSLMGVMIVCCTLPVTLVHFPQWGSMFLPPSKDVNKSTEEYYYTAEWNEEEKQKGLHQNSLKFAENSRSERGKRVASAPTPPNTTPTHA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01605 530 MobiDBLite consensus disorder prediction 492 530 - -
Gma11g01605 530 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Gma11g01605 530 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
Gma11g01605 530 MobiDBLite consensus disorder prediction 492 513 - -
Gma11g01605 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Gma11g01605 530 Gene3D MFS general substrate transporter like domains 58 253 IPR036259 -
Gma11g01605 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 526 - -
Gma11g01605 530 SUPERFAMILY MFS general substrate transporter 59 460 IPR036259 -
Gma11g01605 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 526 IPR044772 GO:0015112
Gma11g01605 530 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01605 Gma-Chr11 17270857 17274133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01605 1 529 Inorganic Solute Cotransporters AT5G60770 81.285 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01605 K02575 - gmx:100807710 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01605 11 17270857 17274133 Gma11g01605 11 17270857 17274133 ECH
Gma12g00702 12 6259454 6259876 Gma11g01605 11 17270857 17274133 GST
Gma13g02881 13 43344022 43346761 Gma11g01605 11 17270857 17274133 PCT
Gma12g01665 12 36990221 36992774 Gma11g01605 11 17270857 17274133 PCT
Gma11g01605 11 17270857 17274133 Gma13g02881 13 43344022 43346761 PCT
Gma11g01605 11 17270857 17274133 Gma12g01665 12 36990221 36992774 PCT