Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01572 ATGGAATTCTGGAACCGCAGATTGCTACTACAGAACGAGGACGTTCCACTCTCCATGCCACCTCTCTCTCACACTCACACCAAACATGCCACAAATGCATCATCATCATCCTCGCCGCCACAATCTTCATCATTCCAATTCCAAAGCCCTCTGCAAGTGTCGATTCGTCCCGTTTTTTCTTCGAGCGTGGCCTACGTCTTCCTTATCCTCTTCACCACCTTCTTCTTCATCGGCTTCGTCTTCCTCTACTTCCGCCAGTTCGCCTCCGACGCGGCCACTTTCCGCCGCCGTCATCCGCCACGCCGGGAGGAGGAGGAGGACGCCGCGGCGGCGGCGTCAGCGAAGAAGTGTCTGCCGGTGGTGGGGCACCGCGGGGGGTGCGCAGAGTGCGCGATATGTCTTGAGGAGCTGCGAGAGGGGGACGCGGTGAAGGTGATTCCGTACTGCAAGCACGTGTTCCACCCGCACTGCATTGACACGTGGCTCGATAAGCAAGTCACGTGCCCCGTGTGCCGGTGCAGTGAGCTTTGTGGAGCGGCGCAACAGAGTGGAGAAGAGGTGGGGTCGGTGTCAGCGACAAGACAACAAGTAGAACAAGAAGAACAAGAAGTGGTTCCAATTCCAAATTTGGATTAG 636 0.5692 MEFWNRRLLLQNEDVPLSMPPLSHTHTKHATNASSSSSPPQSSSFQFQSPLQVSIRPVFSSSVAYVFLILFTTFFFIGFVFLYFRQFASDAATFRRRHPPRREEEEDAAAAASAKKCLPVVGHRGGCAECAICLEELREGDAVKVIPYCKHVFHPHCIDTWLDKQVTCPVCRCSELCGAAQQSGEEVGSVSATRQQVEQEEQEVVPIPNLD 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01572 211 MobiDBLite consensus disorder prediction 184 202 - -
Gma11g01572 211 Pfam Ring finger domain 129 172 IPR001841 -
Gma11g01572 211 SMART ring_2 130 171 IPR001841 -
Gma11g01572 211 MobiDBLite consensus disorder prediction 19 43 - -
Gma11g01572 211 PANTHER RING-H2 FINGER PROTEIN ATL57 34 199 - -
Gma11g01572 211 SUPERFAMILY RING/U-box 129 174 - -
Gma11g01572 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 176 IPR013083 -
Gma11g01572 211 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Gma11g01572 211 MobiDBLite consensus disorder prediction 184 211 - -
Gma11g01572 211 MobiDBLite consensus disorder prediction 24 43 - -
Gma11g01572 211 CDD RING-H2_PA-TM-RING 129 172 - -
Gma11g01572 211 PANTHER RING FINGER DOMAIN-CONTAINING 34 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01572 Gma-Chr11 16886019 16886654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01572 59 176 C3H Transcription Factor Family AT2G27940 35.461 2.18e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01572 - K10664 gmx:102663476 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00735 12 6640186 6641076 Gma11g01572 11 16886019 16886654 GST