Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01555 ATGGAGCAACAGAACCATACGACGGACACTGATCAGTTTTTGATCCTGGGCCCCACACCGAATGAGCCACACACTCCAATGGCGCACGTCAACGTCGCCGACACCAACAACAACGTTGTTGGCGGCGCAGTTAACGTTGGAATTGGTTCTGGTTCGGCGCATGTTGTGGCCGTAGCGAAATCCGAGACTGTAGGTTCGGGACAGGCGGTGAAGAGAGGGAGGGGGAGGCCTCGGAAGAACGACATTGTCGAAAACGCGGTGTCGCCGGCGACGGGGCCGCCGGGATTTTCCGATCAGGCTGCCAAGAGAGGCAGGGGACGTCCCCGTGGTTCTAGGAAACTGCAGATTCTAGCTTCCATTGAAACAGCTGGGGGAAGCATCATACCTCACGTGCTGACTGTGAAAATTGGAGAGGATTTGGTCAGCACGATAATGTCATTTTTTGACAAAGACCCTCAAGCAATTTGCATACTTTCTGCCACTGGTGCTGTTTCAGATGTGGCCATTCGCCAAAATGGTGCTTCTCATGTTATTACGAGACTCGAGGGTACGTTTGAGATATTGTCTTTATCTGGAGCATTTACCTACGCTAATAGCCCTACTGGTCCAGTTAGTAAAACTGGCTCGTTGAGTATTTCATTGGCTAGAACTGATGGGAGGGTTTTTGGAGGTATTCTTGAGAGCGCATTGGTAGCAGCATGCCCTATTCAACTTGTTATGGCCTCTTTCAAGCAAAACATCAGCAGCCAACAAATCAAGAGAAAACAGTTGTCTGAATCTTCTAATGCACCCCTAATGCTGTGCAATTCAGATTCAGAAAGGGACCAACTGAAACTTCTAAAGTTGACGGAAGGTGGTGACAAGAGTTGTCCTTCACCACCACCAACAACAACACTTGAGCCAACAACAGCAACAACTAATGGTGTAGCGGATAATGTCTTTACTGCAACATCCAATGGAGTGGTTGATAATGTTTTTCTTCAAAATCAAAGTGTGCACTCTGCCTCTGTTAATGGTGTTGCTGATTTGGACAGCCAGGCCCCGCAGCCCGCATCAGACTATTCTGACCAAATGACTCATGCAGATGTGAATGCAAGTGTCATTGTCTTATGA 1113 0.4834 MEQQNHTTDTDQFLILGPTPNEPHTPMAHVNVADTNNNVVGGAVNVGIGSGSAHVVAVAKSETVGSGQAVKRGRGRPRKNDIVENAVSPATGPPGFSDQAAKRGRGRPRGSRKLQILASIETAGGSIIPHVLTVKIGEDLVSTIMSFFDKDPQAICILSATGAVSDVAIRQNGASHVITRLEGTFEILSLSGAFTYANSPTGPVSKTGSLSISLARTDGRVFGGILESALVAACPIQLVMASFKQNISSQQIKRKQLSESSNAPLMLCNSDSERDQLKLLKLTEGGDKSCPSPPPTTTLEPTTATTNGVADNVFTATSNGVVDNVFLQNQSVHSASVNGVADLDSQAPQPASDYSDQMTHADVNASVIVL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01555 370 PRINTS AT-hook-like domain signature 71 81 IPR017956 GO:0003677
Gma11g01555 370 PRINTS AT-hook-like domain signature 100 111 IPR017956 GO:0003677
Gma11g01555 370 MobiDBLite consensus disorder prediction 283 305 - -
Gma11g01555 370 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 244 IPR005175 -
Gma11g01555 370 ProSiteProfiles PPC domain profile profile. 124 265 IPR005175 -
Gma11g01555 370 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 359 IPR039605 GO:0003680
Gma11g01555 370 CDD DUF296 129 243 IPR005175 -
Gma11g01555 370 Gene3D - 129 262 - -
Gma11g01555 370 MobiDBLite consensus disorder prediction 63 112 - -
Gma11g01555 370 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 249 - -
Gma11g01555 370 PANTHER DUF296 DOMAIN PROTEIN 1 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01555 Gma-Chr11 16614076 16617640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01555 69 256 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 43.590 1.19e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01555 - - gmx:102660361 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00752 12 6882991 6886897 Gma11g01555 11 16614076 16617640 GST