Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01537 ATGGCGGCGACAGAGAGCACAGTAACTTCAAACCCTAGCAACAGAGAACGACCAAAGCCAAAGCCAAAGCTACTAGTCATAACGGGCCCCACCGCTTCCGGGAAGTCGAAGCTAGCCGTTGATTTGGCCTCCCACTTCCCCGTCGAACTCATCAACGCCGATTCCATGCAGGTCTACCGCGGCCTCGATGTTCTCACCAACAAACTCCCTCTCTCTCACCAGAACGGTACCACCCTGATTTTTCCCCATCCCAACAATCTCTTCCCGTTTCTGAAATCGCGTTTCGAATCTGTTGCAGGAGTTCCGCATCATCTCTTGGGTACCGTAAGCCCCAACGTGGAATTCACTGCCAAAGCGTTTCGGGATTCCGCTATTCCCATTATTGATGATATATTGGCTCGTAATCACTTGCCTGTTATAGTTGGGGGCACTAATTACTATATCCAGGCTCTTGTGAGTCCGTTTCTTTTAGATGATTCTGCAGAAGATATGGATGAAAGCTGTTTGGGTGATCCAACTGGTACATTGCTATGGTCTGGTAACAATTTCATTGGTGAAAATGACTGTTCAAACAATAGTTATGACCTGCTTAAAGATATTGATCCAGTTGCAGCAAATAGAATCCATCCAAATAACCATAGAAAGATAAATCAATATATTAATTTGTACAATCGCACTGGTGTTCTTCCTAGCAATATTTTTCAAGGAAAGGCAGCAGAGAAGTGGGGTCAAGTTGATAACTTAAGATATGATTGTTGTTTTATATGTGTGGATGCATCTCTCCCTGTACTGGACAGATATGTAGAGCAGAGGGTAGATTGCATGATGCATGAGGGATTACTCAATGAAGTCTATGACATTTATAACTTGAATGCAGTTTATACTAGAGGTTTGCGGCAAGCCATTGGTGTCCGTGAATTTGAGCCTCTTCTTAGAACTTGTGTTGTCAAAGACATGCATGAAAGAGAGAGGGAATTGACTGAAGGATCCAGCATAGAAAAGGGAGAGACATTATTTAATCATAATTTGATGGAGTTGGTGAGATCTTCCTCTAATACTGAATCCACAATTCTTTTGGAAGAAGCAATTGAAAAAGTAAAGCTTAATACCCGAAGACTTATTCGCCGTCAGAAGAGGATGCTCAGTCGACTGCAAACTCTGTTTGGTTGGAACATACACTATGTTGATTCCACAGAATCAATATCAAGCAAATCAGAAGATGTATGGACCCGGCAAGTGGTTGAATCTGCTGTGAAGATAGTCAAATCTTTCCTGAGTGAGAATGGAACCATCTTTGGGACGTCAAATGACACGGGGATGAAAATAATCCAAAGGGACCTCTGGACTCAATACATATGCAAGGCCTGCGGAGATCGTGTGCTTAGAGGATTTCATGAATGGGAGCAACACAGACAAGGTCGAGGGCACCGAAAACGTATATCTCGTCTTAAGAGAAAGGCACAAGTTCCTGGTTTCGTGGAAGAGGTGAAGTATTCTGCGTCTGAACAGTTAGATATTTAA 1521 0.4313 MAATESTVTSNPSNRERPKPKPKLLVITGPTASGKSKLAVDLASHFPVELINADSMQVYRGLDVLTNKLPLSHQNGTTLIFPHPNNLFPFLKSRFESVAGVPHHLLGTVSPNVEFTAKAFRDSAIPIIDDILARNHLPVIVGGTNYYIQALVSPFLLDDSAEDMDESCLGDPTGTLLWSGNNFIGENDCSNNSYDLLKDIDPVAANRIHPNNHRKINQYINLYNRTGVLPSNIFQGKAAEKWGQVDNLRYDCCFICVDASLPVLDRYVEQRVDCMMHEGLLNEVYDIYNLNAVYTRGLRQAIGVREFEPLLRTCVVKDMHERERELTEGSSIEKGETLFNHNLMELVRSSSNTESTILLEEAIEKVKLNTRRLIRRQKRMLSRLQTLFGWNIHYVDSTESISSKSEDVWTRQVVESAVKIVKSFLSENGTIFGTSNDTGMKIIQRDLWTQYICKACGDRVLRGFHEWEQHRQGRGHRKRISRLKRKAQVPGFVEEVKYSASEQLDI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01537 506 MobiDBLite consensus disorder prediction 1 24 - -
Gma11g01537 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 291 IPR027417 -
Gma11g01537 506 MobiDBLite consensus disorder prediction 1 15 - -
Gma11g01537 506 Gene3D - 185 237 - -
Gma11g01537 506 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 77 - -
Gma11g01537 506 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 96 428 - -
Gma11g01537 506 Gene3D - 22 446 IPR027417 -
Gma11g01537 506 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 77 IPR039657 -
Gma11g01537 506 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 96 428 IPR039657 -
Gma11g01537 506 Pfam IPP transferase 57 379 - -
Gma11g01537 506 Gene3D Classic Zinc Finger 447 492 - -
Gma11g01537 506 Hamap tRNA dimethylallyltransferase [miaA]. 24 406 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01537 Gma-Chr11 16389639 16393928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01537 11 484 C2H2 Transcription Factor Family AT2G27760 54.583 3.69e-168 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01537 K00791 - gmx:100792690 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01537 11 16389639 16393928 Gma11g01537 11 16389639 16393928 ECH