Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01532 ATGGCTTCACCCTCCGTCACAGACACCGAAACGAAGCCGTTTTCCGTTCTCTTCGTGTGCCTCGGCAACATCTGCAGAAGCCCCGCTGCCGAAGGAGTCTTCACTGACTTAGTCAACGAAAGTGGCCTCAATTCGAAGTTCAAAATCGATTCCGCTGGCACCATCAATTACCACGAGGGAAATGAAGCGGATCCGAGAATGAGGGCAGCTTCAAAGAGGCGTGGGATTCTGATAACTTCTATTTCGAGGCCAATCAAGCCCTCTGATTTCGTTGACTTTGACCTCATTCTTGCTATGGACAAACAGAACAAAGAGGACATATTGGAGGCCTTTAATAGGTGGAAAGGTAGACATTCTCTACCGGATGATTCACATAAAAAGGTTAAGTTGATGTGCTCGTATTGTAAGAAGCATGATGAAAGTGAAGTCCCGGATCCTTATTATGGTGGACATCAAGGGTTTGAGAAGGTGTTGGATTTGCTTGAAGATGCTTGCGGATCATTACTGGAAACCATTTTGGCAGAAAACAAACATGTACAAGAATCCTAA 549 0.4536 MASPSVTDTETKPFSVLFVCLGNICRSPAAEGVFTDLVNESGLNSKFKIDSAGTINYHEGNEADPRMRAASKRRGILITSISRPIKPSDFVDFDLILAMDKQNKEDILEAFNRWKGRHSLPDDSHKKVKLMCSYCKKHDESEVPDPYYGGHQGFEKVLDLLEDACGSLLETILAENKHVQES 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01532 182 Pfam Low molecular weight phosphotyrosine protein phosphatase 16 169 IPR023485 -
Gma11g01532 182 PRINTS LMW phosphotyrosine protein phosphatase signature 16 33 IPR017867 GO:0004725|GO:0006470
Gma11g01532 182 PRINTS LMW phosphotyrosine protein phosphatase signature 59 75 IPR017867 GO:0004725|GO:0006470
Gma11g01532 182 PRINTS LMW phosphotyrosine protein phosphatase signature 143 158 IPR017867 GO:0004725|GO:0006470
Gma11g01532 182 CDD LMWPTP 15 170 - -
Gma11g01532 182 Gene3D - 2 177 - -
Gma11g01532 182 SMART LMWPc_2 14 171 IPR023485 -
Gma11g01532 182 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 3 177 - -
Gma11g01532 182 SUPERFAMILY Phosphotyrosine protein phosphatases I 12 172 IPR036196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01532 Gma-Chr11 16363542 16366290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01532 1 176 Protein tyrosine phosphatase (PTP) family AT3G44620 66.000 5.38e-90 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01532 K25307 - gmx:100527219 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01532 11 16363542 16366290 Gma11g01532 11 16363542 16366290 ECH