Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma11g01531 | ATGGAAGACACTACAACAACGGAGGATCTTACCGACGACCTCCATAGCCTCAGCTTCACTTCCACCACCACCACCACCACCACCGCTGAAATCAAACGCAGCACAAGCTTCAGCTCCTCCACCACCACCACCACCACCACCATAATAACCCCCTCAACCTCCTCCCACTTCAAGCCCCACCGCCCCCTCTCCCTCTCCCTCTCCGACCTCCGCTTCACGCGCCGCCTCGGCTCCGGCGACATGAGCGCCGTCTACCTCGCCGTGCCCAAGGAAGGTAACGACGGCGCGGTGTTCGCGGCGAAGGTGATGGAGAAGGAGGACTTGGCGAGAAGGAACAAGGAAGGGAGGGCGAGGACAGAGAGGGAAATTCTTGAAATGTTGGATCATCCTTTTCTTCCCACGCTCTACGCCTCCATCCACACGCCTAAGTGGCTCTGTTTCTTGACGCTGTTCTGCCCCGGCGGTGACTTGCACGTCCTCCGCCAGCGATTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGATTTTATGCATCGGAAGTGTTGTTGGCACTTGAATACTTACACATGTTGGGGGTAATCTACCGCGACCTGAAGCCGGAAAACGTGTTAATCCGATCAGATGGCCACATAATGCTCACAGACTTCGACCTTTCCTTAAAATGCGACGATTCCTCATCAACGGCACAAATCATCTCCGATCAAAAAACCCTTCCCACAGTCCCACGCAACAATTCCCACGTGGAACCCGCACGTGCCACCTCTTCTTCATGCATGATCTCCAACTGCATAGTCCCAACGGCATCGTGCTTCAACCCAAAACGCAGCCGAAAAAAGAAACAAACACATTTTAACGGGCCCACCTTCGTGGCCGAACCCGTTAACGTCCGGTCCATGTCGTTCGTGGGGACCCACGAGTACTTGGCGCCGGAGATCGTGTCCGGTGAGGGACATGGTAGCGCCGTGGACTGGTGGACGTTGGGAATATTCATGTTTGAACTGTTTTATGGTGTGACACCATTCAAGGGCATGGACCACGAGCTAACCCTAGCGAACGTTGTGGCTCGGGCCCTCGAGTTCCCGAAGGAACCCGCGGCTTCCGCCGCCATGAAAGACCTTATTTCGCAGCTGCTGGTTAAGGACCCGGCGAAGAGGCTGGGGTCGGTGATGGGGGCTTCGGCCATCAAGCAGCACCCGTTTTTTCAAGGCGTGAATTGGGCATTGCTGAGGTGTACGCCTCCACCCTTTGTACCCCCTCCTAGTAGTGTGAATGCTGTATATGATGATCATGAAAGTTGTCCTGAGATTTTCATTGACTGTTTTTAA | 1326 | 0.549 | MEDTTTTEDLTDDLHSLSFTSTTTTTTTAEIKRSTSFSSSTTTTTTTIITPSTSSHFKPHRPLSLSLSDLRFTRRLGSGDMSAVYLAVPKEGNDGAVFAAKVMEKEDLARRNKEGRARTEREILEMLDHPFLPTLYASIHTPKWLCFLTLFCPGGDLHVLRQRFPNKRFLESAVRFYASEVLLALEYLHMLGVIYRDLKPENVLIRSDGHIMLTDFDLSLKCDDSSSTAQIISDQKTLPTVPRNNSHVEPARATSSSCMISNCIVPTASCFNPKRSRKKKQTHFNGPTFVAEPVNVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMDHELTLANVVARALEFPKEPAASAAMKDLISQLLVKDPAKRLGSVMGASAIKQHPFFQGVNWALLRCTPPPFVPPPSSVNAVYDDHESCPEIFIDCF | 441 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma11g01531 | 441 | PANTHER | OS11G0150700 PROTEIN | 5 | 441 | - | - | |
Gma11g01531 | 441 | PANTHER | FLIPPASE KINASE 1-RELATED | 5 | 441 | - | - | |
Gma11g01531 | 441 | SUPERFAMILY | Protein kinase-like (PK-like) | 41 | 427 | IPR011009 | - | |
Gma11g01531 | 441 | SMART | serkin_6 | 70 | 401 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma11g01531 | 441 | ProSiteProfiles | Protein kinase domain profile. | 70 | 401 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma11g01531 | 441 | MobiDBLite | consensus disorder prediction | 23 | 55 | - | - | |
Gma11g01531 | 441 | Gene3D | Phosphorylase Kinase; domain 1 | 69 | 155 | - | - | |
Gma11g01531 | 441 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672|GO:0006468 | |
Gma11g01531 | 441 | ProSitePatterns | Protein kinases ATP-binding region signature. | 76 | 101 | IPR017441 | GO:0005524 | |
Gma11g01531 | 441 | Gene3D | Transferase(Phosphotransferase) domain 1 | 156 | 232 | - | - | |
Gma11g01531 | 441 | Gene3D | Transferase(Phosphotransferase) domain 1 | 297 | 419 | - | - | |
Gma11g01531 | 441 | Pfam | Protein kinase domain | 298 | 401 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma11g01531 | 441 | Pfam | Protein kinase domain | 73 | 231 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma11g01531 | Gma-Chr11 | 16355768 | 16359863 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma11g01531 | 8 | 441 | AGC Kinase Gene Family | AT3G44610 | 62.115 | 0.0 | 530 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_RSK-2 | Gma11g01531 | Pkinase | 1.3e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma11g01531 | K08286 | - | gmx:100792154 | 815.068 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma11g01531 | 11 | 16355768 | 16359863 | Gma11g01531 | 11 | 16355768 | 16359863 | ECH | |
Gma11g01531 | 11 | 16355768 | 16359863 | Gma12g00772 | 12 | 7123011 | 7126414 | ECH |