Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01507 ATGTACAGTACTCATCAGCAACATCAAGGAAAGAACATTCACTCTTCTTCTTCTTCTTCCAGAATGCCAATCCCTTCTGAGAGGCATATGTTCCTTCAAACAGGAAATGGCTCTGGTGATTCTGGACTTGTTCTCTCAACTGATGCTAAGCCTAGATTGAAATGGACACCTGATCTTCATGCAAGGTTTATAGAAGCTGTGCAACAATTAGGAGGAGCTGACAAGGCAACTCCAAAAACGGTAATGAAACTCATGGGGATTCCAGGGCTTACCTTGTATCATCTGAAGAGCCATCTCCAGAAATACAGACTGAGCAAGAGTCTGCATGGACAAAGTAACAATGCGACACACAAAATAACCATAAATTCAGGTTCAGCAACAGATGAAAGACTCAGAGAAAACAACGAAACTCATGTCATGAATAATTTAAACCTTGCCCCTCAGTCTATCAACAAAGATTTACACATAAGTGAGGCACTGCAGATGCAAATAGAGGTGCAGAGAAGACTAAATGAGCAACTTCAGGTGCAAAGACTCCTGCAGCTACGTATTGAGGCTCAAGGAAAATACCTTCAGGCAGTGTTAGAGAAGGCTCAGGAAACACTTGGTAGACAGAATTTAGGAGTAGTAGGACTTGAAGCTGCCAAACTTCAACTCTCAGAGCTAGTGTCAAAAGTGTCCTCTCAGTGCCTGAATTCAGCATTTTCAGAGCTGAAGGAGATACAGGGATTTAGCCCCCACCATCAAAAACAAACACAAACCAACAACAACCAGCCTATAAATGCAAATGACTGTTCCATGGACAGTTGTCTCACATCCTGTGAGGGATCATCACAAAAAGATCAGCAAGAGATACAAAATAGAGGGATGAACTTAATACCCTTCAATGTTCACACATTCATGGAGGGTCCAAATCTTAATAACCTACCAAACACTGACCTCAAGTGGTGTGATCCTGTGAAGAAGAACAACACCTTCCTTACCCGATTGAGCATGCATGCAGAAAGAAGTCCTAGCAACTTGTCTATGAGCATTGGATTACTTGAAGGAGAAACAACTGAGAATAGAAGCACCATTGTTAGGACAGAATCAATTAAACCAGCTGTGGCTGAGAAAGTTTCTCAAGATTATGGATTGCCATCTAACTACTTTGCTGCTTCAAAACTGGACCAAACCACTGAAGATAATAAAGACACTAAAACTAGTTGCAAACAACTGGACTTGAATGGATTCAGTTGGAACTGA 1245 0.4153 MYSTHQQHQGKNIHSSSSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKSLHGQSNNATHKITINSGSATDERLRENNETHVMNNLNLAPQSINKDLHISEALQMQIEVQRRLNEQLQVQRLLQLRIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKLQLSELVSKVSSQCLNSAFSELKEIQGFSPHHQKQTQTNNNQPINANDCSMDSCLTSCEGSSQKDQQEIQNRGMNLIPFNVHTFMEGPNLNNLPNTDLKWCDPVKKNNTFLTRLSMHAERSPSNLSMSIGLLEGETTENRSTIVRTESIKPAVAEKVSQDYGLPSNYFAASKLDQTTEDNKDTKTSCKQLDLNGFSWN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01507 414 MobiDBLite consensus disorder prediction 1 24 - -
Gma11g01507 414 PANTHER MYB-RELATED PROTEIN 2 5 414 - -
Gma11g01507 414 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 50 105 IPR006447 GO:0003677
Gma11g01507 414 Pfam Myb-like DNA-binding domain 52 103 IPR001005 -
Gma11g01507 414 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 414 IPR044848 GO:0003700
Gma11g01507 414 SUPERFAMILY Homeodomain-like 49 105 IPR009057 -
Gma11g01507 414 Gene3D - 49 107 - -
Gma11g01507 414 Coils Coil 157 177 - -
Gma11g01507 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 107 IPR017930 -
Gma11g01507 414 Pfam MYB-CC type transfactor, LHEQLE motif 155 201 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01507 Gma-Chr11 15911822 15915402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01507 82 414 G2-like Transcription Factor Family AT3G04030 46.957 4.21e-79 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma11g01507 Myb_DNA-binding 2.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01507 - - gmx:100781878 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00796 12 7429409 7432310 Gma11g01507 11 15911822 15915402 GST
Gma13g02807 13 42617105 42620249 Gma11g01507 11 15911822 15915402 PCT
Gma12g01744 12 38048878 38051950 Gma11g01507 11 15911822 15915402 PCT
Gma11g01507 11 15911822 15915402 Gma13g02807 13 42617105 42620249 PCT
Gma11g01507 11 15911822 15915402 Gma12g01744 12 38048878 38051950 PCT