Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01504 ATGTCGGAGGCGGAGGAGCTACCCCGGTCTATTGTGCGCCGCGTAGTGAAGGATAAGCTGTCCCGTTGCTCCGAAGACGGAGAAATTTCCGTCAGCAAAGACGCTCTTCTCGCATTCTCCGAAAGCGGTAGGATCTTCATCCACTACCTTTCCGCAACGGCTAATGATATATGTAAGGAGTCTAAGAGGCAGATTATCAATGTTGAGGATGTTTTCAAAGCTCTTGAGGAAACTGAGTTCCCTGAGTTTCTTCGTCCTCTGAAAGCTTCCCTTGAAGAGTTTAGGAAGAAGAATGCTGGAAAGAAAGCTGCAGTGTCAAAGGGAAAGGATGATGAGCCGAGAAAGAAAAGGAAGTTGGAAGGTGAGTCACCTGATAAGGGTGAGGGTTCTGATAAAGCTGAGTTATCGGATAAAGGAGAGGATCCtgataaaggtgagagtgataaaggtgagagtgGTGACGAGACCAATGATTTAAAGGAATGA 486 0.4383 MSEAEELPRSIVRRVVKDKLSRCSEDGEISVSKDALLAFSESGRIFIHYLSATANDICKESKRQIINVEDVFKALEETEFPEFLRPLKASLEEFRKKNAGKKAAVSKGKDDEPRKKRKLEGESPDKGEGSDKAELSDKGEDPDKGESDKGESGDETNDLKE 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01504 161 Coils Coil 58 78 - -
Gma11g01504 161 Gene3D Histone, subunit A 1 156 IPR009072 GO:0046982
Gma11g01504 161 SUPERFAMILY Histone-fold 7 117 IPR009072 GO:0046982
Gma11g01504 161 MobiDBLite consensus disorder prediction 98 161 - -
Gma11g01504 161 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 75 IPR003958 -
Gma11g01504 161 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 2 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01504 Gma-Chr11 15889299 15891126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01504 7 112 CCAAT-HAP3 Transcription Factor Family AT4G14540 29.245 2.94e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gma11g01504 CBFD_NFYB_HMF 4e-08 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01504 K02326 - gmx:100306382 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01504 11 15889299 15891126 Gma11g01504 11 15889299 15891126 ECH
Gma12g00799 12 7453522 7454634 Gma11g01504 11 15889299 15891126 GST