Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01494 ATGGATCGCTTTCGTGAAAATGAAAATGGCATACTTGTTGCTACAGATGTTGCTGCAAGAGGTCTTGATATTCTTGGTGTTAGAACTATTGTCCACTATCGACTTCCACATTCAGCAGAGGTTTATGTTCATAGAAGTGGAAGAATAGCTAGAGCTTCTGCTGAAGGTTCCTTACATGATGTCCCTGCTGGACCTGTGACTTCATTTTTCAGATCTGTCAGGAACACCTTTGATTTTGACTTCGAAGATGACAATGAAGGTTAG 264 0.4091 MDRFRENENGILVATDVAARGLDILGVRTIVHYRLPHSAEVYVHRSGRIARASAEGSLHDVPAGPVTSFFRSVRNTFDFDFEDDNEG 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01494 87 Pfam Helicase conserved C-terminal domain 1 52 IPR001650 -
Gma11g01494 87 PANTHER ATP-DEPENDENT RNA HELICASE DDX24 1 56 - -
Gma11g01494 87 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 57 IPR027417 -
Gma11g01494 87 SMART helicmild6 1 53 IPR001650 -
Gma11g01494 87 PANTHER RNA HELICASE 1 56 - -
Gma11g01494 87 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 87 IPR001650 -
Gma11g01494 87 Gene3D - 1 83 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01494 Gma-Chr11 15753360 15755706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01494 4 83 Eukaryotic Initiation Factors Gene Family AT5G11170 34.568 8.01e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01494 K14805 - gsj:114372964 114.39